Leveltlab / SpectralSegmentationLinks
Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences
☆13Updated this week
Alternatives and similar repositories for SpectralSegmentation
Users that are interested in SpectralSegmentation are comparing it to the libraries listed below
Sorting:
- ☆8Updated 3 years ago
- Denoising and Demixing Pipeline for in vivo Voltage Imaging Data (SGPMD-NMF)☆15Updated 2 years ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆49Updated last year
- motion correction☆17Updated 2 years ago
- ☆38Updated 3 years ago
- Calcium Data Extraction and Analysis☆44Updated 2 years ago
- Flow-Registration toolbox for 2P motion compensation☆24Updated 11 months ago
- An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data☆53Updated last year
- ☆34Updated last month
- spike extraction from calcium signals (Deneux et al., 2016)☆30Updated 5 years ago
- Accurate denoising of voltage imaging data through statistically unbiased prediction, Nature Methods.☆83Updated 2 weeks ago
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆25Updated last year
- Serial-section automated anatomy extension for ScanImage☆14Updated last week
- Segmentation of anatomical structures in a common coordinate space☆33Updated 3 weeks ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- Activity Quantification and Analysis for molecular spatiotemporal signals☆24Updated 2 months ago
- Compression, denoising and demixing of functional imaging recordings☆28Updated 6 years ago
- UCLA Multiphoton Miniature Microscope☆11Updated last month
- Match suite2p ROIs between imaging sessions☆25Updated 6 years ago
- A python toolbox for locating and exporting brain regions from mouse brain images.☆12Updated 8 months ago
- ☆17Updated 2 years ago
- Region Of Interest Classification and Tracking☆19Updated this week
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 5 years ago
- HNCcorr algorithm for neuron identification in calcium imaging datasets.☆12Updated 2 years ago
- Brainways☆18Updated last month
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆49Updated 3 months ago
- Jax implementation of normcorre☆11Updated 5 months ago
- Fast, volumetric cell detection. In development.☆18Updated 2 weeks ago
- MATLAB Streaming Image Viewer - a viewing and analysis platform for ultra-large 3D imaging data☆14Updated 4 years ago
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆74Updated 6 months ago