vazirilab / SIDLinks
Seeded Iterative Demixing (SID) of neuronal activity recordings made using Light Field Microscopy (LFM)
☆28Updated 5 years ago
Alternatives and similar repositories for SID
Users that are interested in SID are comparing it to the libraries listed below
Sorting:
- Automatic Correction for sCMOS-related Noise☆18Updated 4 years ago
- HiLo microscopy reconstruction with NLM denoising☆10Updated last year
- A package for processing diSPIM images with GPU implementation☆14Updated 4 years ago
- Measure PSF FWHM along different axes☆37Updated this week
- ☆15Updated 4 years ago
- Multiscale Image Restoration for fluorescence microscopy☆10Updated 2 years ago
- Codes for 3D Deconvolution of Microscopy Images☆26Updated 7 years ago
- code of the registration and deconvolution project☆37Updated 4 years ago
- Resolution Enhancement Algorithm using Deblurring by Pixel Reassignment. This repository implements cutting-edge techniques for improving…☆31Updated 5 months ago
- Matlab routines for online non-rigid motion correction of calcium imaging data☆153Updated 3 years ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆29Updated 3 months ago
- GPU accelerated beam propagation tools for biological light tissue simulations☆39Updated 7 years ago
- python functions for simulating optical transfer functions☆80Updated last year
- Zernike Optimized Localization Algorithm for 3D single molecule localizations☆19Updated 3 years ago
- Accurate denoising of voltage imaging data through statistically unbiased prediction, Nature Methods.☆95Updated 5 months ago
- Code for running a multicolor structured illumination microscopy (SIM) experiment using a DLP6500 digital micromirror device (DMD) and pe…☆65Updated 3 weeks ago
- A toolbox for analysing and simulating Image Scanning Microscopy (ISM) datasets.☆16Updated 6 months ago
- Python bindings for scalar and vectorial models of the 3D microscope point spread function.☆54Updated last year
- STED simulation platform written in Python☆14Updated last year
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆47Updated 3 months ago
- Free Analysis and Interactive Reconstruction for Structured Illumination Microscopy☆98Updated last week
- 🚀⏱️ Official implementation for "neural space-time model for dynamic multi-shot imaging"☆45Updated 2 months ago
- A collection of 3D image processing functions and applications with GPU implementation☆14Updated 4 years ago
- A Python software library with a variety of functions for (optical) microscopy image restoration, reconstruction and analysis.☆87Updated 5 months ago
- Denoising and Demixing Pipeline for in vivo Voltage Imaging Data (SGPMD-NMF)☆15Updated 2 years ago
- Things we use regularly☆29Updated 5 months ago
- ThunderSTORM: a comprehensive ImageJ plugin for SMLM data analysis and super-resolution imaging☆108Updated 7 years ago
- Official implementation of Ring Deconvolution Microscopy from https://www.nature.com/articles/s41592-025-02684-5☆55Updated 3 months ago
- Adaptive Optics plugin for MicroManager☆12Updated 3 years ago
- ☆23Updated 8 months ago