vazirilab / SIDLinks
Seeded Iterative Demixing (SID) of neuronal activity recordings made using Light Field Microscopy (LFM)
☆28Updated 5 years ago
Alternatives and similar repositories for SID
Users that are interested in SID are comparing it to the libraries listed below
Sorting:
- HiLo microscopy reconstruction with NLM denoising☆10Updated 7 months ago
- Automatic Correction for sCMOS-related Noise☆18Updated 3 years ago
- Matlab routines for online non-rigid motion correction of calcium imaging data☆152Updated 3 years ago
- 🚀⏱️ Official implementation for "neural space-time model for dynamic multi-shot imaging"☆42Updated 11 months ago
- A package for processing diSPIM images with GPU implementation☆14Updated 3 years ago
- STED simulation platform written in Python☆13Updated 11 months ago
- Codes for 3D Deconvolution of Microscopy Images☆26Updated 7 years ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆27Updated 10 months ago
- GPU accelerated beam propagation tools for biological light tissue simulations☆37Updated 6 years ago
- Measure PSF FWHM along different axes☆33Updated 3 months ago
- python functions for simulating optical transfer functions☆75Updated last year
- Multiscale Image Restoration for fluorescence microscopy☆10Updated 2 years ago
- Accurate denoising of voltage imaging data through statistically unbiased prediction, Nature Methods.☆85Updated last month
- code of the registration and deconvolution project☆35Updated 4 years ago
- Denoising and Demixing Pipeline for in vivo Voltage Imaging Data (SGPMD-NMF)☆15Updated 2 years ago
- Resolution Enhancement Algorithm using Deblurring by Pixel Reassignment. This repository implements cutting-edge techniques for improving…☆28Updated 3 weeks ago
- A toolbox for analysing and simulating Image Scanning Microscopy (ISM) datasets.☆14Updated 2 months ago
- ☆14Updated 4 years ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆42Updated 10 months ago
- Code for running a multicolor structured illumination microscopy (SIM) experiment using a DLP6500 digital micromirror device (DMD) and pe…☆62Updated 2 weeks ago
- Zernike Optimized Localization Algorithm for 3D single molecule localizations☆19Updated 2 years ago
- Adaptive Optics plugin for MicroManager☆12Updated 3 years ago
- Free Analysis and Interactive Reconstruction for Structured Illumination Microscopy☆95Updated 3 weeks ago
- Compression, denoising and demixing of functional imaging recordings☆28Updated 7 years ago
- Python bindings for scalar and vectorial models of the 3D microscope point spread function.☆50Updated last year
- An image processing package for removing streaks from SPIM images☆37Updated last year
- M. Chen, Z. F. Phillips, and L. Waller, Quantitative differential phase contrast (DPC) microscopy with computational aberration correctio…☆35Updated 3 years ago
- Online available files of "A practical guide to fast structured illumination microscopy"☆17Updated 9 years ago
- Serial-section automated anatomy extension for ScanImage☆15Updated last month
- High-Resolution, Large Field-of-View, and Multi-ViewSingle Objective Light-Sheet Microscopy☆29Updated last year