SUwonglab / rss-net
RSS-NET: Regression with Summary Statistics exploiting Network Topology
☆18Updated 4 months ago
Alternatives and similar repositories for rss-net:
Users that are interested in rss-net are comparing it to the libraries listed below
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆17Updated 2 years ago
- Benchmarking gene and variant prioritization algorithms for GWAS data☆15Updated 4 years ago
- Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)☆23Updated 4 years ago
- LocusCompare is an interactive visualization tool for comparing two genetic association datasets.☆21Updated last year
- Primo☆16Updated 3 years ago
- Code for EpiMap data browser☆14Updated 7 months ago
- This is a repository to help make plots similar to Figure 2 in https://www.biorxiv.org/content/10.1101/388165v3☆12Updated 5 years ago
- ☆21Updated 3 years ago
- ☆20Updated 6 months ago
- Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).☆13Updated 2 years ago
- cEll tyPe enrIChment☆14Updated 2 years ago
- Create LocusZoom-style plots in R.☆21Updated last year
- An R package for generating comparative regional association plots☆18Updated 3 weeks ago
- Course Materials for Genomics Data Mining☆22Updated 4 months ago
- GWAS gold standards repository☆30Updated last year
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆44Updated last year
- Code for creating cell-type-specific regulatory element annotation files☆18Updated 7 months ago
- Identify Intra-, Inter-donor variations in bulk or single cell longitudinal dataset☆18Updated last year
- Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.☆18Updated 2 years ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆31Updated 3 years ago
- PredictDB Pipeline for GTEx v7 data☆17Updated 2 years ago
- haploR: utilities for mining Haploreg and other similar web-based tools☆9Updated 9 months ago
- software package for integrative genetic association analysis☆34Updated last year
- A collection of various utilities for GWAS summary statistics☆26Updated 8 months ago
- Multi-Omic Strategies for TWAS☆12Updated last year
- ☆18Updated 7 years ago
- Bead-based single-cell atac processing☆31Updated 3 years ago
- cancereffectsizeR: Estimate somatic mutation rates and quantify selection in cancer☆17Updated 2 months ago
- Code and data resources accompanying Urbut et al (2017), "Flexible statistical methods for estimating and testing effects in genomic stud…☆23Updated last year
- Human brain, >200,000 nuclei☆24Updated 3 years ago