BonevLab / Noack_et_al_NatNeuro2021Links
Publication Page for the Noack et al. 2021 Nature Neuroscience paper
☆10Updated 3 years ago
Alternatives and similar repositories for Noack_et_al_NatNeuro2021
Users that are interested in Noack_et_al_NatNeuro2021 are comparing it to the libraries listed below
Sorting:
- Snakemake pipeline for plate scATAC-seq processing☆26Updated 2 years ago
- Analyzing chromatin accessibility data in R☆18Updated 2 years ago
- ☆18Updated 5 years ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆25Updated 3 years ago
- ☆18Updated 2 years ago
- A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …☆26Updated 3 years ago
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆13Updated 2 years ago
- Analytical tools and pipelines for bulk and single cell epigenomic and human genetic data☆27Updated 5 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆32Updated 8 months ago
- ☆52Updated last year
- ☆20Updated 2 years ago
- ☆26Updated 2 years ago
- Systematic analyses of intronic polyadenylation from standard RNAseq data☆14Updated last year
- Analysis pipeline for our circSC manuscript☆14Updated 3 years ago
- Dynamic Analysis of Alternative Polyadenylation from single-cell RNA-seq (scDaPars)☆18Updated 4 years ago
- Analysis code for "Perturbation-response genes reveal signaling footprints in cancer gene expression"☆20Updated 7 years ago
- ☆16Updated 2 years ago
- A collection of perl scripts for NGS analysis☆16Updated last year
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆31Updated 2 years ago
- Transcriptional regulatory network inference from gene expression and prior information with LASSO-StARS☆15Updated 3 years ago
- ☆19Updated last year
- Uncertainty-aware quantification of Transposable Elements expression in scRNA-seq☆20Updated last month
- A robust and accurate cell type classifier for single cell RNA-seq data☆17Updated 2 years ago
- ChromSCape☆14Updated 4 months ago
- ☆29Updated 4 years ago
- Pipeline for Universal Mapping of ATAC-seq☆25Updated 2 months ago
- Analysis repository for "Droplet-based combinatorial indexing for massive scale single-cell epigenomics"☆11Updated 6 years ago
- ☆15Updated 9 months ago
- ☆12Updated 4 years ago
- Code to reproduce analyses in Nasser, Bergman, Fulco, Guckelberger, Doughty et al Nature 2021☆16Updated 4 years ago