faryabib / too-many-cellsLinks
Cluster single cells and analyze cell clade relationships with colorful visualizations.
☆46Updated 4 years ago
Alternatives and similar repositories for too-many-cells
Users that are interested in too-many-cells are comparing it to the libraries listed below
Sorting:
- ☆63Updated 5 years ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆94Updated 7 months ago
- Identify genes with spatial expression trends in single-cell gene expression data☆50Updated 7 years ago
- Clone of the Bioconductor repository for the scran package.☆46Updated last year
- Coarse-graining of large single-cell RNA-seq data into metacells☆91Updated 3 weeks ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆44Updated 3 years ago
- R package for robust clustering of single cell RNA sequencing data☆36Updated last year
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated last year
- ☆64Updated 6 years ago
- scRNA-seq cell type identification☆43Updated 6 years ago
- Functions for single cell data analysis☆32Updated 4 years ago
- ☆50Updated 5 years ago
- ☆41Updated 4 years ago
- Code repository for the Tumor Immune Cell Atlas (TICA) project☆63Updated 3 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆47Updated last year
- SCDC☆45Updated 6 months ago
- A tool for removing doublets from single-cell RNA-seq data☆75Updated 5 years ago
- Genotype-free demultiplexing of pooled single-cell RNA-Seq, using a hidden state model for identifying genetically distinct samples withi…☆41Updated 2 years ago
- ☆37Updated 9 years ago
- an integrative analysis tool for analysing large-scale single cell RNA-sequencing data☆36Updated 2 years ago
- A portable and fast single cell type identifier☆63Updated 4 years ago
- ConsensusTME Gene Sets and R Script☆39Updated last year
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆45Updated 2 years ago
- An R shiny based tool used for single cell RNA-seq data visualization and analysis.☆34Updated 5 years ago
- ☆61Updated 4 months ago
- ☆43Updated 5 years ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆32Updated last year
- R package for semi-supervised single-cell data integration☆94Updated 3 weeks ago
- Cluster Identity Predictor (R package implementation)☆21Updated 3 years ago
- Capybara: A computational tool to measure cell identity and fate transitions☆60Updated 3 years ago