songweige / scDGNLinks
Supervised Adversarial Alignment of Single-Cell RNA-seq Data
☆30Updated 5 years ago
Alternatives and similar repositories for scDGN
Users that are interested in scDGN are comparing it to the libraries listed below
Sorting:
- Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…☆43Updated 5 years ago
- Fast motif matching in R☆46Updated last year
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆55Updated 4 years ago
- epigenome analysis to rank transcription factors☆31Updated 2 years ago
- ☆43Updated 2 years ago
- Alleloscope is a method for allele-specific copy number estimation that can be applied to single cell DNA and ATAC sequencing data (separ…☆31Updated 2 years ago
- ☆34Updated 6 years ago
- supporting code for the multinomial single cell RNA-Seq paper☆52Updated 4 years ago
- ☆37Updated 8 months ago
- ConsensusTME Gene Sets and R Script☆39Updated last year
- Multi-study integration of cellular trajectories☆19Updated 5 years ago
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆57Updated last year
- ☆59Updated last year
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 4 years ago
- ClusterMap is an R package to analyze and compare two or more single cell expression datasets.☆20Updated 2 years ago
- Single-cell Scalable Visualization and Analytics☆26Updated 6 years ago
- PECA is a software for inferring context specific gene regulatory network from paired gene expression and chromatin accessibility data☆45Updated last month
- Imputation method for scRNA-seq based on low-rank approximation☆77Updated last year
- Discover differential transcript usage from polyA-captured single cell RNA-seq data☆52Updated 2 years ago
- Big data Regression for predicting DNase I hypersensitivity☆31Updated last year
- ☆20Updated 6 years ago
- Code related to the Celligner manuscript☆46Updated 5 years ago
- ☆47Updated 10 months ago
- <<------ Use SnapATAC!!☆26Updated 6 years ago
- Identifying tumor cells at the single-cell level using machine learning☆49Updated last year
- scNMT-seq gastrulation☆42Updated 2 years ago
- Evaluation of the effect of quantification choices on RNA velocity estimates☆27Updated 4 years ago
- Reproducibility repository accompanying Wilk, Rustagi, Zhao, et al. "A single-cell atlas of the peripheral immune response to severe COVI…☆49Updated 4 years ago
- BRIE: Bayesian Regression for Isoform Estimate in Single Cells☆42Updated last year
- Single-Cell Sequencing Quality Control and Processing Software☆30Updated 6 years ago