☆17Sep 17, 2025Updated last year
Alternatives and similar repositories for MarkovHC
Users that are interested in MarkovHC are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- an efficient Hi-C data processing pipeline☆20Mar 26, 2024Updated 2 years ago
- simpler single cell RNAseq data Visualization☆12Feb 28, 2025Updated last year
- Single-cell Consensus Clusters of Encoded Subspaces☆15Jul 27, 2026Updated 3 months ago
- LaTeX template of graduate Thesis [University of Chinese Academy of Sciences]☆12Nov 7, 2017Updated 9 years ago
- A pipeline for scRNA-seq data analysis☆16Mar 26, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Feature Selection in scRNA-seq☆11Sep 9, 2021Updated 5 years ago
- Build single sample pair-based (rule-based) classifiers using top-score pairs or random forest for multi-class problems.☆13Oct 21, 2026Updated 2 weeks ago
- ☆22Jan 16, 2026Updated 9 months ago
- scID☆14Oct 21, 2021Updated 5 years ago
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆46Jul 23, 2021Updated 5 years ago
- A method for calculating single cell entropy and reconstructing cell differentiation lineage using single-cell RNA-seq data☆10May 26, 2023Updated 3 years ago
- ☆17Jun 17, 2021Updated 5 years ago
- Visualising single-cell trajectories, including comparisons between two models 📈☆32Dec 9, 2021Updated 4 years ago
- Genomic trajectories (pseudotimes) in the presence of heterogenous environmental and genetic backgrounds☆12Mar 21, 2019Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Code and analysis for the 1000 tools paper☆11Nov 12, 2021Updated 4 years ago
- ☆15Dec 9, 2019Updated 6 years ago
- ☆22Nov 11, 2024Updated last year
- ☆11Sep 27, 2022Updated 4 years ago
- CellNet, for cancer☆11Jul 14, 2022Updated 4 years ago
- ☆17Feb 18, 2025Updated last year
- ☆22Mar 16, 2019Updated 7 years ago
- Spatial Transcriptome Image and Expression integration enables single cell level spatial data analysis☆14Sep 7, 2024Updated 2 years ago
- Niche Interactions and Cellular Heterogeneity in Extracellular Signaling☆61Aug 13, 2026Updated 2 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A DSL for layered grammar of interactive graphics in R☆23Apr 30, 2021Updated 5 years ago
- Non-negative Independent Factor Analysis for single cell RNA-seq☆12Feb 25, 2022Updated 4 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆35Apr 4, 2025Updated last year
- Implementation of the treeSeg algorithm as an R package.☆14Feb 2, 2026Updated 9 months ago
- MOJITOO: a fast and universal method for integration of multimodal single cell data☆13Oct 23, 2024Updated 2 years ago
- ☆14Jul 22, 2026Updated 3 months ago
- R package for benchmarking single cell analysis methods☆34Oct 4, 2023Updated 3 years ago
- Scalable, downsampling-free automated cell-population discovery, feature engineering, classification and visualization of single-cell (mo…☆12Aug 30, 2021Updated 5 years ago
- Isoform-level expression patterns in single-cell RNA-sequencing data☆12Apr 20, 2023Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- deconvolution for RNAseq and bisulfite sequencing☆12Aug 17, 2020Updated 6 years ago
- Variational autoencoder for single cell RNA-seq datasets☆45Aug 15, 2017Updated 9 years ago
- Regulatory network inference and driver gene evaluation using integrative multi-omics analysis and penalized regression☆18Jan 26, 2026Updated 9 months ago
- Multi-omics multi-layered network integration and interpretation☆15Oct 15, 2024Updated 2 years ago
- Analysis of Single Cell Expression, Normalization and Differential expression☆14Feb 29, 2020Updated 6 years ago
- An R package for time course sequencing data analysis☆21May 8, 2023Updated 3 years ago
- A statistical simulator for rational scRNA-seq experimental design☆14Dec 14, 2020Updated 5 years ago