shenorrLabTRDF / cellAlignLinks
☆41Updated 4 years ago
Alternatives and similar repositories for cellAlign
Users that are interested in cellAlign are comparing it to the libraries listed below
Sorting:
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆38Updated 3 years ago
- An r package that works as a wrapper to homologene☆46Updated last year
- an integrative analysis tool for analysing large-scale single cell RNA-sequencing data☆33Updated last year
- COMET Single-Cell Marker Detection tool☆31Updated 3 years ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆40Updated 2 years ago
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 5 years ago
- ☆29Updated 2 years ago
- ☆41Updated last week
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆45Updated 3 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated 2 years ago
- Clone of the Bioconductor repository for the scran package.☆42Updated 9 months ago
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆45Updated last year
- Cluster Identity Predictor (R package implementation)☆20Updated 3 years ago
- A tool for removing doublets from single-cell RNA-seq data☆74Updated 4 years ago
- ☆35Updated 3 months ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆43Updated 3 weeks ago
- R package for specialised analysis of single cell data☆38Updated 2 years ago
- Single-cell Orientation Tracing☆21Updated 3 years ago
- ☆28Updated 6 years ago
- ☆49Updated 5 years ago
- R package for detection of cell-cell interaction using Non-negative Tensor Decomposition☆34Updated this week
- Clone of the Bioconductor repository for the batchelor package.☆16Updated 3 months ago
- Covarying neighborhood analysis (CNA) is a method for finding structure in- and conducting association analysis with multi-sample single-…☆52Updated 3 weeks ago
- ConsensusTME Gene Sets and R Script☆39Updated last year
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 7 months ago
- Repository for scRNAseq study of human kidneys☆15Updated 6 years ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆18Updated 4 years ago
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆37Updated 2 years ago
- R package for analysing single cell data☆55Updated 2 years ago
- scRNA-seq cell type identification☆43Updated 5 years ago