zhouzilu / DENDRO
Genetic Heterogeneity Profiling by Single Cell RNA Sequencing
☆34Updated 4 years ago
Related projects ⓘ
Alternatives and complementary repositories for DENDRO
- scWGCNA☆55Updated 2 years ago
- Clone identification from single-cell data☆59Updated 2 years ago
- Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…☆32Updated last year
- ☆37Updated 3 years ago
- Discover differential transcript usage from polyA-captured single cell RNA-seq data☆49Updated last year
- A tool for removing doublets from single-cell RNA-seq data☆69Updated 3 years ago
- ☆27Updated 3 months ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆63Updated 6 months ago
- ☆31Updated 5 years ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆68Updated 2 months ago
- A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and au…☆43Updated 3 years ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆28Updated 10 months ago
- R package to detect breakpoints and assign somies to scATAC-seq data☆33Updated 2 months ago
- mutation(barcode) caller for 10x single cell data☆43Updated 4 years ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆43Updated 7 months ago
- ☆30Updated 6 months ago
- MarcoPolo is a clustering-free approach to the exploration of bimodally expressed genes along with group information in single-cell RNA-s…☆20Updated this week
- ☆29Updated last year
- ☆29Updated 8 months ago
- A database of useful gene signatures for single-cell analysis☆20Updated 7 months ago
- ☆53Updated 3 years ago
- SCDC☆42Updated last year
- Downstream analysis script for sci-fate (TF-gene linkage analysis / cell linkage analysis)☆24Updated 4 years ago
- ☆40Updated 3 months ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆29Updated last year
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆38Updated 8 months ago
- identifying disease critical cell types and programs from single cell RNAseq☆51Updated 2 years ago
- ☆46Updated last year
- UniverSC: a flexible cross-platform single-cell data processing pipeline☆43Updated 8 months ago
- ☆55Updated 2 months ago