Python package for integrating and analyzing multiple single-cell datasets (A Python version of LIGER)
☆31May 16, 2025Updated last year
Alternatives and similar repositories for pyliger
Users that are interested in pyliger are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆12Mar 18, 2026Updated 3 months ago
- Single cell STEM (scSTEM) is a shiny app based R package for visualizing and clustering genes in pseudotime ordered single cell RNA-seq d…☆21Jul 7, 2022Updated 3 years ago
- Finding surprising needles (=features) in haystacks (=single cell/spatial genomics data).☆13Jan 12, 2024Updated 2 years ago
- Projecting RNA measurements onto single cell atlases to extract cell type-specific expression profiles using scProjection☆16Aug 28, 2023Updated 2 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆35Apr 4, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Integrating temporal gene expression modalities for trajectory inference and disease prediction☆11Sep 20, 2022Updated 3 years ago
- Code to reproduce analysis of Milo manuscript☆16Aug 3, 2022Updated 3 years ago
- R package for integrating and analyzing multiple single-cell datasets☆431Feb 4, 2026Updated 5 months ago
- Reworked clustering metrics for assessing performance in imbalanced settings☆18Jun 3, 2024Updated 2 years ago
- SingleCellFusion--a tool to integrate single-cell transcriptome and epigenome data☆12Mar 13, 2022Updated 4 years ago
- MACA: Marker-based automatic cell-type annotation for single cell expression data☆25Jul 12, 2023Updated 2 years ago
- Dependency-aware deep generative models for multitasking analysis of spatial genomics data☆47Jul 10, 2024Updated last year
- ☆10Dec 4, 2023Updated 2 years ago
- ☆10Sep 27, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Test genes for Spatial Variation