gillislab / MetaNeighborLinks
A method to rapidly assess cell type identity using both functional and random gene sets
☆39Updated 4 months ago
Alternatives and similar repositories for MetaNeighbor
Users that are interested in MetaNeighbor are comparing it to the libraries listed below
Sorting:
- ☆50Updated 7 years ago
- ☆32Updated 5 years ago
- scWGCNA☆60Updated 2 years ago
- mutation(barcode) caller for 10x single cell data☆45Updated 4 years ago
- ☆61Updated 5 years ago
- A tool for removing doublets from single-cell RNA-seq data☆74Updated 4 years ago
- ☆41Updated 3 weeks ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated last year
- ☆49Updated 10 months ago
- R implementation of MULTI-seq sample classification workflow☆62Updated last year
- ☆59Updated 9 months ago
- ☆62Updated 4 years ago
- Create cisTarget databases☆50Updated 3 months ago
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆77Updated 2 years ago
- ☆47Updated 4 months ago
- Publication Page for Satpathy*, Granja* et al 2019☆94Updated 5 years ago
- A tool for unsupervised projection of single cell RNA-seq data☆96Updated 4 years ago
- Single cell epigenomic clustering based on accessibility pattern☆23Updated 2 years ago
- Single Cell Analysis of Five'Ends☆50Updated last year
- Code to reproduce the analysis of "Decoding gene regulation in the mouse embryo using single-cell multi-omics""☆40Updated 2 years ago
- Functional Inference of Gene Regulation☆44Updated 10 months ago
- A rapid and robust plate-based single cell ATAC-seq (scATAC-seq) method☆43Updated 4 years ago
- scRNA-seq cell type identification☆43Updated 5 years ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆40Updated 2 years ago
- Single cell RNA-seq analysis bundle☆34Updated 5 years ago
- ☆35Updated 8 months ago
- Genotype-free demultiplexing of pooled single-cell RNA-Seq, using a hidden state model for identifying genetically distinct samples withi…☆41Updated 2 years ago
- Data and analysis scripts for our Embryo Timecourse paper.☆68Updated 5 years ago
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆76Updated 2 months ago
- Covarying neighborhood analysis (CNA) is a method for finding structure in- and conducting association analysis with multi-sample single-…☆51Updated this week