A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotator (EDTA), DeepTE, RepeatMasker and RM_TRIPS.
☆28Dec 7, 2022Updated 3 years ago
Alternatives and similar repositories for FasTE
Users that are interested in FasTE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆23Jan 13, 2026Updated 9 months ago
- SINE annotation tool for plant genomes☆19Jan 21, 2024Updated 2 years ago
- Accompanying repository for our publications on manual curation methods for Transposable Elements.☆24Jun 26, 2024Updated 2 years ago
- A script that parses the OrthoFinder output and keeps only the orthogroups that meet specific criteria☆19Oct 14, 2020Updated 5 years ago
- Neural network classification of TE☆104Apr 3, 2026Updated 6 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Centromics: visualing centromeres with multiple omics data