gatech-genemark / ProtHintLinks
Protein hint generation pipeline for gene finding in eukaryotic genomes
☆60Updated last year
Alternatives and similar repositories for ProtHint
Users that are interested in ProtHint are comparing it to the libraries listed below
Sorting:
- FastOMA is a scalable software package to infer orthology relationship.☆79Updated last week
- A program for assessing the T2T genome continuity☆83Updated last week
- TSEBRA: Transcript Selector for BRAKER☆47Updated 9 months ago
- A Nextflow pipeline for evaluating assembly quality☆37Updated last week
- orthology assignment using phylogenetic and network analyses☆45Updated 5 months ago
- Best practices and workflow for genome annotation☆77Updated 4 months ago
- Tiberius is a deep learning gene finder.☆69Updated last week
- PacBio BAM toolkit☆46Updated 6 months ago
- A program for detection of tRNA genes☆67Updated 2 years ago
- Hybrid error correction of long reads using colored de Bruijn graphs☆103Updated 11 months ago
- ☆64Updated last month
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆58Updated 2 years ago
- Evaluate variant calls and its combination with k-mer multiplicity☆67Updated 2 years ago
- MUM&Co is a simple bash script that uses Whole Genome Alignment information provided by MUMmer (only v4) to detect Structural Variation☆71Updated 5 months ago
- EnTAP is moving to GitLab for future changes https://gitlab.com/PlantGenomicsLab/EnTAP☆41Updated 7 months ago
- Analysis of convergence between organismal traits and DNA/protein sequences☆57Updated 3 weeks ago
- hifiasm_meta - de novo metagenome assembler, based on hifiasm, a haplotype-resolved de novo assembler for PacBio Hifi reads.☆68Updated last month
- Synteny Imager☆64Updated last month
- SynVisio is an interactive multiscale visualization tool that lets you explore the results of McScanX a popular synteny and collinearity …☆88Updated last year