stevemussmann / admixturePipelineLinks
A pipeline that accepts a VCF file to run through Admixture
☆60Updated 5 months ago
Alternatives and similar repositories for admixturePipeline
Users that are interested in admixturePipeline are comparing it to the libraries listed below
Sorting:
- Pipelines and tools for the processing of ancient and modern HTS data.☆47Updated this week
- Tutorial about R package PopGenome☆41Updated 6 years ago
- Tools and Utilities for msmc and msmc2☆47Updated last year
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆42Updated 5 years ago
- Pinpoints the mutation favored by selection☆34Updated 3 years ago
- ☆44Updated 8 years ago
- A program to call variants from genome alignment☆80Updated last month
- Detecting natural selection from population-based genetic data☆27Updated 6 years ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆56Updated 2 years ago
- Automated de novo assembly of whole chloroplast genomes.☆45Updated 8 months ago
- SelectionHapStats is a repository of Python scripts written to identify natural selection events in the genome and R scripts written to v…☆26Updated 6 years ago
- Hybridization detection using phylogenetic invariants☆47Updated 7 months ago
- Infer demographic history with the Moran model☆47Updated 3 months ago
- SambaR: Snp datA Management and Basic Analyses in R☆28Updated last month
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆74Updated 4 years ago
- A software to assemble chloroplast and mitochodrial genomes using PacBio data☆39Updated 5 years ago
- Tutorial on using popular tools for learning about population history☆51Updated 6 years ago
- TSEBRA: Transcript Selector for BRAKER☆47Updated 6 months ago
- Genome Annotation Without Nightmares☆45Updated 4 months ago
- Tutorials on evolutionary genomics☆44Updated 3 years ago
- RAiSD: software to detect positive selection based on multiple signatures of a selective sweep and SNP vectors☆36Updated last year
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆80Updated 4 years ago
- ☆24Updated 7 years ago
- Estimate recombination rates from population genetic data☆66Updated 4 years ago
- Likelihood-based Selective Sweep Detection☆37Updated last year
- LDna: an R package to perform linkage disequilibrium network analysis☆31Updated last year
- Assessing confidence in introgression among four populations☆27Updated 4 years ago
- Analysis of convergence between organismal traits and DNA/protein sequences☆53Updated last week
- Graph-aware Retrieval of Selective Sweeps☆21Updated 8 months ago
- PhyloAcc a software to detect the changes of conservation of a genomic region☆32Updated last month