guillemylla / Crickets_Genome_Annotation
Gennome annotation scripts for the crickets Gryllus bimaculatus and Laupala kohalensis.
☆13Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for Crickets_Genome_Annotation
- R package to draw syntenic plots in 3 different styles☆39Updated 11 months ago
- Genome alignment and synteny plots☆27Updated last year
- Chromosome-level synteny plotting using orthologous regions☆28Updated 2 months ago
- R package for comparison of synteny conservation at the genome-wide scale.☆13Updated 5 months ago
- ☆18Updated last year
- Accompanying repository for our publications on manual curation methods for Transposable Elements.☆19Updated 4 months ago
- scripts for the project of seven thaliana genomes assembly☆38Updated 3 years ago
- Convert RepeatMasker ".out" file into a gff3 with colors!!!☆19Updated 4 years ago
- Script to help assessing the evolutionary history of a TE family☆14Updated 5 years ago
- ☆20Updated 3 months ago
- Analyses of sex chromosome evolution in songbirds☆15Updated 5 years ago
- ☆18Updated 2 years ago
- Likelihood-based Selective Sweep Detection☆35Updated last year
- Domain based annotation of transposable elements☆19Updated last month
- Codes for the lettuce resequencing project in 2020☆26Updated 3 years ago
- scripts to parse and analyse MCScanX collinearity output☆29Updated 4 years ago
- Reconstruction of ancestral genome maps☆16Updated 6 years ago
- Automatic evaluation of HGTs☆25Updated 2 months ago
- ☆24Updated 10 months ago
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆16Updated last year
- The GitHub repository for the A. thaliana pan-NLR'ome project.☆16Updated 5 years ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆33Updated 2 months ago
- Yet another Hi-C scaffolding tool☆19Updated 3 weeks ago
- This tool performs an automatic identification, annotation, and analysis of the MYB gene family in plants. It can be applied to new trans…☆17Updated 4 months ago
- a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees☆24Updated 5 months ago
- Toolkit for evolutionary analyses of linkage groups☆23Updated 4 months ago
- These are scripts that I use frequently in genome annotation projects. Some of them have evolved awkwardly so the code is difficult to fo…☆15Updated 7 years ago
- Tree House Explorer (THEx) is a novel genome browser for exploring phylogenetic and genomic data in one succinct place.☆12Updated 9 months ago
- Transposable Elements MOvement detection using LOng reads☆19Updated this week
- Dinoflagellate Annotation Workflow☆12Updated 2 years ago