☆18Jan 11, 2026Updated last month
Alternatives and similar repositories for amp-diffusion
Users that are interested in amp-diffusion are comparing it to the libraries listed below
Sorting:
- List of papers on protein binding site prediction☆11Aug 11, 2023Updated 2 years ago
- ☆15Aug 13, 2023Updated 2 years ago
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆37Nov 7, 2024Updated last year
- The GAN model for designing AMP☆16Aug 19, 2025Updated 6 months ago
- ☆17Updated this week
- Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"☆17Dec 8, 2024Updated last year
- ☆18Aug 28, 2023Updated 2 years ago
- A conditionally adapted protein language model for the generation of enzymes☆23Nov 26, 2024Updated last year
- ☆14Jul 14, 2023Updated 2 years ago
- Files and utilities for protein-emoji☆27Nov 4, 2022Updated 3 years ago
- Source code of the paper "Protein Sequence and Structure Co-Design with Equivariant Translation"☆24Sep 18, 2023Updated 2 years ago
- ☆27Feb 10, 2024Updated 2 years ago
- ☆25Oct 8, 2024Updated last year
- Equivariant Scalar Fields for Molecular Docking with Fast Fourier Transforms☆31Dec 8, 2023Updated 2 years ago
- Datasets for P2Rank project. https://github.com/rdk/p2rank☆26Nov 8, 2024Updated last year
- Joint Sequence-Structure Generation of Nucleic Acid and Protein Complexes with SE(3)-Discrete Diffusion☆59May 6, 2024Updated last year
- A diffusion model for structure-based drug design with faster inference from learned representations of protein structure.☆31Dec 18, 2023Updated 2 years ago
- ☆31Dec 12, 2024Updated last year
- ☆32Oct 18, 2024Updated last year
- RNAFlow: RNA Structure & Sequence Design via Inverse Folding-Based Flow Matching☆82Aug 11, 2024Updated last year
- The official code for "TaxDiff: Taxonomic-Guided Diffusion Model for Protein Sequence Generation"☆74Aug 23, 2024Updated last year
- A Group Symmetric Stochastic Differential Equation Model for Molecule Multi-modal Pretraining, ICML'23☆33Mar 29, 2024Updated last year
- Rapid generation of high-quality structure figures for publication with PyMOL-PUB☆87Oct 30, 2024Updated last year
- Awesome papers and codes list of small molecule mass spectrometry-related machine learning methods☆35Jan 18, 2026Updated last month
- LatentDE: Latent-based Directed Evolution for Protein Sequence Design☆37Apr 2, 2025Updated 10 months ago
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆328Oct 28, 2024Updated last year
- Enzyme datasets used to benchmark enzyme-substrate promiscuity models☆40Jun 28, 2021Updated 4 years ago
- Biological Relationships - Biorels data preparation infrastructure for biology and drug discovery☆15May 19, 2025Updated 9 months ago
- ☆36Nov 7, 2022Updated 3 years ago
- Predicting high-fitness mutations based on protein inverse folding models☆75Sep 30, 2025Updated 5 months ago
- Annotated implementations of equivariant (graph) neural networks in Jax: EGNN, SEGNN, NequIP.☆41Mar 1, 2025Updated 11 months ago
- A Text-guided Protein Design Framework, Nat Mach Intell 2025 (https://www.nature.com/articles/s42256-025-01011-z)☆101Jan 11, 2025Updated last year
- Repository for Protein-Vec, a protein embedding mixture of experts model☆38Jan 24, 2024Updated 2 years ago
- Generative method to design novel proteins using a diffusion model☆43Mar 16, 2023Updated 2 years ago
- DockCADD An automated computational framework for molecular docking☆15Mar 9, 2025Updated 11 months ago
- download all oral & spotlight papers from neurips, iclr, icml or any openreview conference☆20Dec 6, 2025Updated 2 months ago
- Enhancer-promoter interaction model☆10Nov 28, 2022Updated 3 years ago
- 这里提供了一个yaml可以通过conda来快速无痛一键安装ESMfold,算是已经踩过所有通过官方安装遇到的暗坑了。☆16Jan 31, 2024Updated 2 years ago
- ☆10Apr 30, 2025Updated 9 months ago