microsoft / protein-frame-flowLinks
Fast protein backbone generation with SE(3) flow matching.
☆303Updated last year
Alternatives and similar repositories for protein-frame-flow
Users that are interested in protein-frame-flow are comparing it to the libraries listed below
Sorting:
- ☆203Updated last year
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆226Updated 5 months ago
- Implementation for SE(3) diffusion model with application to protein backbone generation☆413Updated 2 years ago
- FoldFlow: SE(3)-Stochastic Flow Matching for Protein Backbone Generation☆272Updated last year
- De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds☆183Updated last year
- Diffusion-based all-atom protein generative model.☆228Updated 4 months ago
- AlphaFold Meets Flow Matching for Generating Protein Ensembles☆502Updated 2 months ago
- EigenFold: Generative Protein Structure Prediction with Diffusion Models☆181Updated 2 years ago
- The Family of Diffusion Protein Language Models (DPLM)☆292Updated 5 months ago
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆181Updated last year
- ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)☆352Updated 2 years ago
- Protein Design with Guided Discrete Diffusion☆140Updated last year
- A generalized computational framework for biomolecular modeling.☆381Updated last week
- Implementation of DiffDock-PP: Rigid Protein-Protein Docking with Diffusion Models in PyTorch (ICLR 2023 - MLDD Workshop)☆225Updated 2 years ago
- Generative modeling of molecular dynamics trajectories☆185Updated last month
- Implementation of Chroma, generative models of protein using DDPM and GNNs, in Pytorch☆159Updated 3 years ago
- Benchmarking framework for protein representation learning. Includes a large number of pre-training and downstream task datasets, models …☆263Updated 8 months ago
- gRNAde is a Generative AI framework for inverse design of 3D RNA structure and function☆281Updated 2 weeks ago
- DiffLinker: Equivariant 3D-Conditional Diffusion Model for Molecular Linker Design☆367Updated last year
- Source code for RNA-FrameFlow: SE(3) Flow Matching for 3D RNA Backbone Design☆87Updated 2 months ago
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆146Updated 8 months ago
- A list of manuscripts/tools using diffusion on biological enttieis☆99Updated 2 years ago
- Official code repository for EquiFold: Protein Structure Prediction with a Novel Coarse-Grained Structure Representation☆126Updated 2 years ago
- A geometry-complete diffusion generative model (GCDM) for 3D molecule generation and optimization. (Nature CommsChem)☆222Updated 7 months ago
- ☆210Updated last year
- Geometric Vector Perceptrons --- a rotation-equivariant GNN for learning from biomolecular structure☆314Updated last month
- A Euclidean diffusion model for structure-based drug design.☆480Updated 6 months ago
- Comprehensive benchmarking of protein-ligand structure prediction methods. (ICML 2024 AI4Science)☆181Updated last month
- Implementation of FlowSite and HarmonicFlow from the paper "Harmonic Self-Conditioned Flow Matching for Multi-Ligand Docking and Binding …☆103Updated last year
- Pocket2Mol: Efficient Molecular Sampling Based on 3D Protein Pockets☆378Updated 2 years ago