[ICLR 2025] Hotspot-Driven Peptide Design via Multi-Fragment Autoregressive Extension
☆20May 5, 2025Updated last year
Alternatives and similar repositories for PepHAR
Users that are interested in PepHAR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆134Apr 16, 2025Updated last year
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆113May 25, 2025Updated last year
- A cyclic peptide-protein complex dataset derived from AFDB.☆68Mar 17, 2026Updated 6 months ago
- ☆13Mar 28, 2025Updated last year
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆138Oct 30, 2025Updated 11 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆13Jan 25, 2026Updated 8 months ago
- Comprehensive Benchmark for Protein-Peptide Complex Structure Prediction with AlphaFold3☆19Sep 4, 2025Updated last year
- Codes for our paper "UniMoMo: Unified Generative Modeling of 3D Molecules for De Novo Binder Design" (ICML 2025)☆99Dec 7, 2025Updated 10 months ago
- Tool to design cyclic peptides that mimic proteins and target their binding partners.☆18Jul 9, 2024Updated 2 years ago
- ☆16Dec 14, 2023Updated 2 years ago
- ☆29Mar 20, 2025Updated last year
- List of papers about Peptide research using Deep Learning☆49Oct 3, 2026Updated last week
- Reinforcement learning based cyclic peptide binder design☆20Jul 22, 2025Updated last year
- AgenDao, The Dao of Agent☆17Aug 26, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆17Jun 22, 2025Updated last year
- Official code repository for the paper Drug Discovery with Dynamic Goal-aware Fragments (ICML 2024)☆20Sep 9, 2024Updated 2 years ago
- Peptide Virtual Screening Pipeline☆14Jul 3, 2019Updated 7 years ago
- Evaluating Protein Binding Interfaces with Transformer Networks☆46Oct 24, 2023Updated 2 years ago
- Code for reproducing paper describing methods for representing peptides☆18Sep 11, 2026Updated last month
- ☆18May 16, 2026Updated 4 months ago
- Official repository of "Multi-level Interaction Modeling for Protein Mutational Effect Prediction"☆11Jun 30, 2024Updated 2 years ago
- ☆12Aug 26, 2024Updated 2 years ago
- [PNAS 2025] Code of "Manifold-Constrained Nucleus-Level Denoising Diffusion Model for Structure-Based Drug Design".☆39Jul 17, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆10Apr 1, 2024Updated 2 years ago
- A convinent tool to visualize AlphaFold 3 prediction results with PyMOL and matplotlib☆20May 20, 2024Updated 2 years ago
- Unified all-atom structure-conditioned molecule generation☆22Nov 21, 2025Updated 10 months ago
- ☆16Oct 27, 2024Updated last year
- Implementation of NeurIPS24 paper "Generalized Protein Pocket Generation with Prior-Informed Flow Matching"☆21May 15, 2025Updated last year
- NeurIPS24: Aligning Target-Aware Molecule Diffusion Models with Exact Energy Optimization☆46Apr 2, 2025Updated last year
- CREMP: Conformer-Rotamer Ensembles of Macrocyclic Peptides for Machine Learning☆33Aug 13, 2024Updated 2 years ago
- A docker image containing changes applied to the ETKDG conformer generator workflow, with example scripts.☆13Jun 15, 2019Updated 7 years ago
- Fine-tuning DeepSeek-OCR-2 for Optical Chemical Structure Recognition, including LoRA SFT, full SFT, customized GSPO and ReFT.☆22Jul 5, 2026Updated 3 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A graph transformer-based approach for drug-target interaction prediction☆16Jan 31, 2024Updated 2 years ago
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆278Jul 24, 2025Updated last year
- RINGER: Rapid Conformer Generation for Macrocycles with Sequence-Conditioned Internal Coordinate Diffusion☆24Aug 13, 2024Updated 2 years ago
- ☆67Nov 28, 2023Updated 2 years ago
- 3 DOF arm robot simulation with ROS2 and gazebo☆13Sep 29, 2022Updated 4 years ago
- Integrating Deep Neural Networks and Symbolic Inference for Organic Reactivity Prediction☆13Jan 8, 2022Updated 4 years ago
- In silico directed evolution of peptide binders with AlphaFold☆280Sep 25, 2026Updated 2 weeks ago