ISMB-24/Bioinformatics: Tertiary Structure-based RNA Inverse Folding with Generative Diffusion Models
☆53Nov 17, 2024Updated last year
Alternatives and similar repositories for RiboDiffusion
Users that are interested in RiboDiffusion are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- gRNAde is a Generative AI framework for inverse design of 3D RNA structure and function☆293Dec 16, 2025Updated 3 months ago
- RNAFlow: RNA Structure & Sequence Design via Inverse Folding-Based Flow Matching☆82Aug 11, 2024Updated last year
- ☆37Jan 14, 2025Updated last year
- A deep learning method for the prediction of internal ribosome entry sites (IRES) of circRNAs☆17Jul 6, 2025Updated 9 months ago
- An analysis of a new experimentally-derived nucleic acid binding chemical library☆28Jan 27, 2023Updated 3 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- RiboNucleic Acid (RNA) Language Model☆159Oct 3, 2025Updated 6 months ago
- Nature Methods: RhoFold+, Accurate RNA 3D structure prediction using a language model-based deep learning approach☆223May 29, 2025Updated 10 months ago
- Source code for RNA-FrameFlow: SE(3) Flow Matching for 3D RNA Backbone Design☆97Oct 15, 2025Updated 5 months ago
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆66Jul 17, 2024Updated last year
- Geometry-aware protein binding site predictor☆25Aug 29, 2024Updated last year
- ☆13Dec 1, 2025Updated 4 months ago
- Multimodal encoder-only transformer model for image-based protein predictions☆15Dec 12, 2023Updated 2 years ago
- Nature Computational Science: RhoDesign is a structure-to-sequence model for RNA design.☆58Nov 8, 2024Updated last year
- SE(3) diffusion models for generating CDR loops☆10Feb 6, 2024Updated 2 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆20Oct 18, 2024Updated last year
- Joint Sequence-Structure Generation of Nucleic Acid and Protein Complexes with SE(3)-Discrete Diffusion☆60May 6, 2024Updated last year
- Python implementation of the FR3D software for searching and annotating RNA 3D structures☆22Mar 26, 2026Updated 2 weeks ago
- Nucleic Acids Research 2024:RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆70Jul 22, 2024Updated last year
- ☆80Feb 26, 2024Updated 2 years ago
- ☆21Dec 20, 2024Updated last year
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆64Apr 3, 2026Updated last week
- ☆43Oct 1, 2023Updated 2 years ago
- ☆35Dec 15, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- ☆13Jun 5, 2024Updated last year
- ☆221Mar 2, 2024Updated 2 years ago
- ☆13Dec 5, 2024Updated last year
- Learning to Generate UTR Sequences for Optimized Ribosome Load and Gene Expression☆23May 11, 2025Updated 10 months ago
- ☆15May 29, 2024Updated last year
- Code repository of "Deep generative design of RNA family sequences"☆40Updated this week
- ☆77Aug 23, 2023Updated 2 years ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Feb 21, 2026Updated last month
- ☆16May 22, 2025Updated 10 months ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- RiboNN: predicting translation efficiencies from mRNA sequences☆55Jan 12, 2026Updated 2 months ago
- ☆29May 14, 2025Updated 10 months ago
- Clustering tool for biomolecular structural ensembles and data in general.☆10Aug 24, 2020Updated 5 years ago
- Python utility to estimate, compare, and reweight RNA energetics across many secondary structure algorithms.☆107Nov 20, 2025Updated 4 months ago
- FrameDiPT: an SE(3) diffusion model for protein structure inpainting☆59Jan 22, 2024Updated 2 years ago
- Rapid structure-based virtual screening for RNA targets.☆27Mar 6, 2026Updated last month
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆88Jun 23, 2024Updated last year