Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)
☆109Apr 16, 2025Updated 11 months ago
Alternatives and similar repositories for PepGLAD
Users that are interested in PepGLAD are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆103May 25, 2025Updated 10 months ago
- This repository is the official code source of PPFlow: Target-Aware Peptide Design with Torsional Flow Matching (ICML2024)☆92May 17, 2025Updated 10 months ago
- Official repository for DiffPepBuilder and DiffPepDock tools☆124Oct 24, 2025Updated 5 months ago
- Codes for our paper "UniMoMo: Unified Generative Modeling of 3D Molecules for De Novo Binder Design" (ICML 2025)☆86Dec 7, 2025Updated 4 months ago
- Official implementation of CP-Composer. It is the released code of 《Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints》…☆23Aug 6, 2025Updated 8 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- This repo contains the codes for our paper "Generalist Equivariant Transformer Towards 3D Molecular Interaction Learning" (ICML 2024).☆43Jul 4, 2025Updated 9 months ago
- Codebase of the paper "Aligning Protein Conformation Ensemble Generation with Physical Feedback" (ICML 2025)☆16Jul 6, 2025Updated 9 months ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆129Feb 26, 2025Updated last year
- Geometric Algebra Flow Matching (GAFL) for Protein Backbone Generation☆19Oct 31, 2025Updated 5 months ago
- Code for humanization of antibody and nanobody☆78Aug 28, 2025Updated 7 months ago
- A comprehensive benchmark on the performances of multiple protein backbone generative models.☆65Feb 2, 2026Updated 2 months ago
- A cyclic peptide-protein complex dataset derived from AFDB.☆41Mar 17, 2026Updated 3 weeks ago
- Source code for RNA-FrameFlow: SE(3) Flow Matching for 3D RNA Backbone Design☆97Oct 15, 2025Updated 5 months ago
- SurfDock is a Surface-Informed Diffusion Generative Model for Reliable and Accurate Protein-ligand Complex Prediction☆240Sep 29, 2025Updated 6 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆39Mar 7, 2026Updated last month
- Inpainting protein sequence and structure☆12Nov 10, 2023Updated 2 years ago
- In silico directed evolution of peptide binders with AlphaFold☆265Jan 5, 2026Updated 3 months ago
- ☆136Aug 8, 2024Updated last year
- Fast protein backbone generation with SE(3) flow matching.☆322Jul 19, 2024Updated last year
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆104Apr 7, 2023Updated 3 years ago
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆92Jun 11, 2025Updated 10 months ago
- Official open-source of Antibody Design Using a Score-based Diffusion Model Guided by Evolutionary, Physical, and Geometric Constraints☆51Jun 30, 2025Updated 9 months ago
- AlphaFold Meets Flow Matching for Generating Protein Ensembles☆521Mar 22, 2026Updated 2 weeks ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Official Implemetation of ConfDiff (ICML'24) - Protein Conformation Generation via Force-Guided SE(3) Diffusion Models☆81Sep 12, 2024Updated last year
- ☆221Mar 2, 2024Updated 2 years ago
- Python Toolbox For Rosetta Silent Files Processing☆10Aug 2, 2021Updated 4 years ago
- Diffusion-based all-atom protein generative model.☆233Aug 27, 2025Updated 7 months ago
- Protein representation and design under a single training scheme☆24Mar 3, 2026Updated last month
- Template-based protein design with Raygun☆79Mar 28, 2026Updated 2 weeks ago
- Toward High-Accuracy Open-Source Biomolecular Structure Prediction.☆1,794Updated this week
- Official implementation of NeurIPS'24 paper "Bridge-IF: Learning Inverse Protein Folding with Markov Bridges"☆18Mar 16, 2025Updated last year
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆128Nov 19, 2025Updated 4 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆99Jul 29, 2024Updated last year
- Building more accurate protein structures from backbone torsion angles☆15Mar 21, 2025Updated last year
- LLM for Drug Editing, ICLR 2024☆161May 28, 2024Updated last year
- ☆21Mar 20, 2025Updated last year
- Official repository for the paper "Peptide design through binding interface mimicry with PepMimic" accepted by Nature Biomedical Engineer…☆30Oct 20, 2025Updated 5 months ago
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆122May 27, 2025Updated 10 months ago
- PocketGen (Nature Machine Intelligence 24): Generating Full-Atom Ligand-Binding Protein Pockets☆214Apr 15, 2025Updated 11 months ago