Energy-guided binder design pipeline built on BindCraft
☆18Jun 6, 2025Updated 11 months ago
Alternatives and similar repositories for BECraft
Users that are interested in BECraft are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This repository provides with custom code and analysis scripts to generate structural ensembles of intrinsically disordered proteins by u…☆23Oct 31, 2025Updated 6 months ago
- HalluDesign, a hallucination-driven all-atom framework for the iterative co-optimization and co-design of protein sequences and structure…☆78Updated this week
- A tutorial for Streamlined Alchemical Free Energy Perturbations with NAMD☆16Apr 3, 2026Updated last month
- Antigen-receptor Design Against Peptide-MHC Targets☆21Jan 9, 2026Updated 4 months ago
- A drop-in replacement for Rosetta Relax☆28Jan 30, 2026Updated 3 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Predicting mutational effects on protein binding from folding energy. ICML 2025.☆45Aug 4, 2025Updated 9 months ago
- ☆23Dec 11, 2024Updated last year
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆89Dec 3, 2025Updated 5 months ago
- deepSimDEF offers single- and multi-channel deep learning models for functional analysis of genes using Gene Ontology annotations of gene…☆13May 13, 2022Updated 4 years ago
- ☆16Mar 3, 2023Updated 3 years ago
- ☆28Aug 8, 2025Updated 9 months ago
- ☆36Mar 19, 2025Updated last year
- ☆26May 12, 2026Updated 2 weeks ago
- ☆59May 29, 2025Updated 11 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ML-optimized library design with improved fitness and diversity for protein engineering☆37Nov 5, 2025Updated 6 months ago
- A command-line interface and Python library for generating AlphaFold3 input files.☆40Jan 2, 2026Updated 4 months ago
- Code for designing biased protein states☆81Apr 15, 2026Updated last month
- Predicts the solubility and usability for purification of proteins expressed in E. coli using protein language models☆43Dec 16, 2024Updated last year
- AlphaBind code + model accompanying pre-print☆90Jul 24, 2025Updated 10 months ago
- Genie 3 is a fast, all-atom SE(3)-equivariant diffusion model for protein design. It achieves state-of-the-art performance on uncondition…☆103May 10, 2026Updated 2 weeks ago
- ☆32Mar 20, 2025Updated last year
- Rapid Generation of Rare Event Pathways Using Direction Guided Adaptive Sampling: From Ligand Unbinding to Protein (Un)Folding☆38Nov 25, 2025Updated 6 months ago
- ☆21Oct 22, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- RNAFlow: RNA Structure & Sequence Design via Inverse Folding-Based Flow Matching☆83Aug 11, 2024Updated last year
- ☆23Jun 10, 2025Updated 11 months ago
- PPI version of Pythia☆35Apr 15, 2026Updated last month
- JAX translation of boltz☆28Aug 4, 2025Updated 9 months ago
- ☆138Jun 3, 2025Updated 11 months ago
- Extension of ThermoMPNN for double mutant predictions☆62Mar 23, 2026Updated 2 months ago
- ☆21Dec 3, 2024Updated last year
- ☆24Dec 2, 2024Updated last year
- ☆86Oct 23, 2025Updated 7 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆22Dec 20, 2024Updated last year
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆107Apr 15, 2026Updated last month
- Software for automated analysis of molecular dynamics trajectories☆109Apr 12, 2026Updated last month
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆105May 25, 2025Updated last year
- ☆34Mar 2, 2026Updated 2 months ago
- Lightweight induced fit docking☆22May 22, 2023Updated 3 years ago
- A program analyzing 3D protein structures from PDB to generate 2D binding motifs☆17Jul 18, 2021Updated 4 years ago