bytedance / ConfDiffLinks
Official Implemetation of ConfDiff (ICML'24) - Protein Conformation Generation via Force-Guided SE(3) Diffusion Models
☆75Updated last year
Alternatives and similar repositories for ConfDiff
Users that are interested in ConfDiff are comparing it to the libraries listed below
Sorting:
- Rotamer Density Estimator is an Unsupervised Learner of the Effect of Mutations on Protein-Protein Interaction (ICLR 2023)☆61Updated last year
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆103Updated 2 years ago
- ☆96Updated last year
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆106Updated 9 months ago
- Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)☆81Updated last year
- Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model (NeurIPS 2023 Poster)☆36Updated 2 years ago
- Code implementation of "Diffusion probabilistic modeling of protein backbones in 3D for the motif-scaffolding problem" https://arxiv.org/…☆74Updated 2 years ago
- This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…☆56Updated last month
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆85Updated last year
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆102Updated 8 months ago
- ☆78Updated 11 months ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆125Updated 11 months ago
- ☆55Updated 8 months ago
- Implementation of DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing☆89Updated 2 years ago
- Codebase of paper "Structure Language Models for Protein Conformation Generation" (ICLR'25)☆74Updated 11 months ago
- Evaluating Protein Binding Interfaces with Transformer Networks☆47Updated 2 years ago
- A standardized protein design benchmark for motif-scaffolding problems☆73Updated last week
- ☆65Updated 2 years ago
- A benchmark for comprehensive evaluation on protein structure tokenization methods☆42Updated 6 months ago
- Implementation of FlowSite and HarmonicFlow from the paper "Harmonic Self-Conditioned Flow Matching for Multi-Ligand Docking and Binding …☆104Updated last year
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆47Updated last year
- ☆108Updated 2 years ago
- Code for humanization of antibody and nanobody☆72Updated 5 months ago
- ☆35Updated 10 months ago
- ☆39Updated 7 months ago
- A comprehensive benchmark on the performances of multiple protein backbone generative models.☆65Updated this week
- Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)☆52Updated last month
- Learning Harmonic Molecular Representations on Riemannian Manifold, ICLR, 2023☆25Updated 2 years ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆133Updated 2 months ago
- Implementation of MapDiff: "Mask-prior-guided denoising diffusion improves inverse protein folding" in PyTorch☆43Updated 6 months ago