Alternatives and similar repositories for ConfDiff

Users that are interested in ConfDiff are comparing it to the libraries listed below

• wengong-jin / DSMBind
  ☆89Updated 7 months ago
• TencentAI4S / HuDiff
  Code for humanization of antibody and nanobody
  ☆42Updated 6 months ago
• DeepGraphLearning / S3F
  Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)
  ☆36Updated 6 months ago
• stebliankin / piston
  Evaluating Protein Binding Interfaces with Transformer Networks
  ☆45Updated last year
• Barabasi-Lab / AI-Bind
  Interpretable AI pipeline improving binding predictions for novel protein targets and ligands
  ☆39Updated last year
• JocelynSong / SurfPro
  ☆27Updated 2 months ago
• lujiarui / Str2Str
  Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)
  ☆77Updated last year
• richardshuai / fampnn
  Sidechain conditioning and modeling for full-atom protein sequence design
  ☆106Updated 3 months ago
• EureKaZhu / DiffAffinity
  Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model (NeurIPS 2023 Poster)
  ☆35Updated last year
• THUNLP-MT / PepGLAD
  Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)
  ☆71Updated last month
• pengzhangzhi / ab_opt
  Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.
  ☆59Updated last year
• blt2114 / ProtDiff_SMCDiff
  Code implementation of "Diffusion probabilistic modeling of protein backbones in 3D for the motif-scaffolding problem" https://arxiv.org/…
  ☆74Updated last year
• alexechu / protpardelle
  ☆65Updated last year
• luost26 / RDE-PPI
  Rotamer Density Estimator is an Unsupervised Learner of the Effect of Mutations on Protein-Protein Interaction (ICLR 2023)
  ☆58Updated 11 months ago
• LeiLiLab / EnzyGen
  ☆34Updated 4 months ago
• anton-bushuiev / PPIformer
  Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)
  ☆44Updated 4 months ago
• WillHua127 / ReactZyme
  Official repository of ReactZyme
  ☆33Updated 7 months ago
• Wangchentong / Proteus
  Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.
  ☆75Updated 11 months ago
• Ced3-han / PepFlowww
  Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)
  ☆81Updated last week
• BioinfoMachineLearning / ATOMRefine
  3D equivariant graph transformer for all-atom refinement of protein tertiary structures
  ☆26Updated last year
• A4Bio / FoldToken_open
  ☆18Updated 7 months ago
• Mingchenchen / AF3Score
  A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation
  ☆48Updated 2 weeks ago
• THUNLP-MT / dyMEAN
  This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"
  ☆109Updated 3 months ago
• liuyf020419 / SCUBA-D
  ☆60Updated last year
• WillHua127 / GENzyme
  Official repository of GENzyme
  ☆51Updated 6 months ago
• pgmikhael / clipzyme
  Reaction-Conditioned Virtual Screening of Enzymes
  ☆35Updated last month
• jiaxianyan / DeltaDock
  ☆24Updated 7 months ago
• yehlincho / BoltzDesign1
  ☆112Updated this week
• THUNLP-MT / MEAN
  This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.
  ☆95Updated 2 years ago
• blt2114 / MotifBench
  A standardized protein design benchmark for motif-scaffolding problems
  ☆59Updated last month