bytedance / ConfDiffLinks
Official Implemetation of ConfDiff (ICML'24) - Protein Conformation Generation via Force-Guided SE(3) Diffusion Models
☆69Updated last year
Alternatives and similar repositories for ConfDiff
Users that are interested in ConfDiff are comparing it to the libraries listed below
Sorting:
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆99Updated 2 years ago
- ☆95Updated last year
- Rotamer Density Estimator is an Unsupervised Learner of the Effect of Mutations on Protein-Protein Interaction (ICLR 2023)☆59Updated last year
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆94Updated 5 months ago
- Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)☆79Updated last year
- Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model (NeurIPS 2023 Poster)☆36Updated last year
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆95Updated 7 months ago
- ☆51Updated 5 months ago
- ☆65Updated 2 years ago
- Code implementation of "Diffusion probabilistic modeling of protein backbones in 3D for the motif-scaffolding problem" https://arxiv.org/…☆73Updated 2 years ago
- Implementation of FlowSite and HarmonicFlow from the paper "Harmonic Self-Conditioned Flow Matching for Multi-Ligand Docking and Binding …☆103Updated last year
- Implementation of DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing☆88Updated last year
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆84Updated last year
- ☆107Updated 2 years ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆121Updated 8 months ago
- A standardized protein design benchmark for motif-scaffolding problems☆70Updated 3 months ago
- This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…☆49Updated 11 months ago
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆46Updated 11 months ago
- Evaluating Protein Binding Interfaces with Transformer Networks☆46Updated 2 years ago
- Codebase of paper "Structure Language Models for Protein Conformation Generation" (ICLR'25)☆66Updated 8 months ago
- Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)☆49Updated last month
- ☆76Updated 9 months ago
- A geometric flow matching model for generative protein-ligand docking and affinity prediction. (ISMB 2025)☆115Updated 2 months ago
- ☆38Updated 5 months ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆126Updated 4 months ago
- ☆33Updated 7 months ago
- Official repository of ReactZyme☆36Updated last year
- A comprehensive benchmark on the performances of multiple protein backbone generative models.☆64Updated 5 months ago
- 3D equivariant graph transformer for all-atom refinement of protein tertiary structures☆27Updated 2 years ago
- Code and Pre-Trained Models for "AttnPacker: An end-to-end deep learning method for protein side-chain packing"☆90Updated last year