bytedance / ConfDiff
Official Implemetation of ConfDiff (ICML'24) - Protein Conformation Generation via Force-Guided SE(3) Diffusion Models
☆51Updated 7 months ago
Alternatives and similar repositories for ConfDiff:
Users that are interested in ConfDiff are comparing it to the libraries listed below
- ☆85Updated 6 months ago
- Rotamer Density Estimator is an Unsupervised Learner of the Effect of Mutations on Protein-Protein Interaction (ICLR 2023)☆57Updated 10 months ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆103Updated last month
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆73Updated 9 months ago
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆31Updated 4 months ago
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆69Updated 6 months ago
- Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)☆75Updated last year
- Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model (NeurIPS 2023 Poster)☆34Updated last year
- Sidechain conditioning and modeling for full-atom protein sequence design☆91Updated last month
- ☆66Updated last year
- ☆106Updated 2 years ago
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆91Updated 2 years ago
- Evaluating Protein Binding Interfaces with Transformer Networks☆45Updated last year
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆58Updated last year
- [NeurIPS 2023] DrugCLIP: Contrastive Protein-Molecule Representation Learning for Virtual Screening☆82Updated 11 months ago
- Official repository of EnzymeFlow☆85Updated 4 months ago
- ☆91Updated 5 months ago
- ☆25Updated 3 weeks ago
- Official repository of ReactZyme☆28Updated 6 months ago
- Code implementation of "Diffusion probabilistic modeling of protein backbones in 3D for the motif-scaffolding problem" https://arxiv.org/…☆73Updated last year
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆56Updated this week
- Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)☆45Updated 3 months ago
- This repo contains the codes for our paper "Generalist Equivariant Transformer Towards 3D Molecular Interaction Learning" (ICML 2024).☆30Updated 6 months ago
- ☆68Updated 2 months ago
- Geometric Flow Matching for Generative Protein-Ligand Docking and Affinity Prediction (ISMB 2025)☆85Updated last week
- A comprehensive benchmark on the performances of multiple protein backbone generative models.☆54Updated 3 weeks ago
- Interpretable AI pipeline improving binding predictions for novel protein targets and ligands☆37Updated 11 months ago
- Code for humanization of antibody and nanobody☆39Updated 4 months ago
- 🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)☆51Updated last week
- This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…☆40Updated 4 months ago