bytedance / ConfDiffLinks
Official Implemetation of ConfDiff (ICML'24) - Protein Conformation Generation via Force-Guided SE(3) Diffusion Models
☆71Updated last year
Alternatives and similar repositories for ConfDiff
Users that are interested in ConfDiff are comparing it to the libraries listed below
Sorting:
- ☆95Updated last year
- Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)☆80Updated last year
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆96Updated 6 months ago
- Rotamer Density Estimator is an Unsupervised Learner of the Effect of Mutations on Protein-Protein Interaction (ICLR 2023)☆59Updated last year
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆100Updated 2 years ago
- Code implementation of "Diffusion probabilistic modeling of protein backbones in 3D for the motif-scaffolding problem" https://arxiv.org/…☆73Updated 2 years ago
- ☆65Updated 2 years ago
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆96Updated 7 months ago
- Codebase of paper "Structure Language Models for Protein Conformation Generation" (ICLR'25)☆66Updated 9 months ago
- ☆53Updated 6 months ago
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆84Updated last year
- Implementation of FlowSite and HarmonicFlow from the paper "Harmonic Self-Conditioned Flow Matching for Multi-Ligand Docking and Binding …☆103Updated last year
- Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model (NeurIPS 2023 Poster)☆36Updated last year
- This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…☆52Updated last year
- ☆75Updated 9 months ago
- Official repository of ReactZyme☆37Updated last year
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆46Updated last year
- ☆39Updated 5 months ago
- Code for humanization of antibody and nanobody☆65Updated 3 months ago
- Implementation of DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing☆88Updated 2 years ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆121Updated 9 months ago
- Implementation of MapDiff: "Mask-prior-guided denoising diffusion improves inverse protein folding" in PyTorch☆40Updated 4 months ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆127Updated 3 weeks ago
- ☆33Updated 8 months ago
- A standardized protein design benchmark for motif-scaffolding problems☆70Updated 4 months ago
- Evaluating Protein Binding Interfaces with Transformer Networks☆46Updated 2 years ago
- ☆107Updated 2 years ago
- A geometric flow matching model for generative protein-ligand docking and affinity prediction. (ISMB 2025)☆117Updated 3 months ago
- ☆22Updated last year
- 3D equivariant graph transformer for all-atom refinement of protein tertiary structures☆27Updated 2 years ago