Alternatives and similar repositories for RhoDesign

Users that are interested in RhoDesign are comparing it to the libraries listed below

• TencentAI4S / IgGM
  Official Implementation of IgGM
  ☆173Updated last month
• programmablebio / pepmlm
  Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling
  ☆108Updated 2 months ago
• TencentAI4S / tfold
  open source code for Tencent tFold
  ☆137Updated 9 months ago
• ml4bio / RiboDiffusion
  ISMB-24/Bioinformatics: Tertiary Structure-based RNA Inverse Folding with Generative Diffusion Models
  ☆51Updated last year
• ai4protein / VenusFSFP
  VenusFSFP: Few-Shot Protein Fitness Prediction
  ☆102Updated last month
• dahjan / DMS_opt
  ☆73Updated 5 years ago
• bytedance / PXDesignBench
  A Unified Evaluation Suite for Protein Design
  ☆121Updated 3 weeks ago
• AstraZeneca / DiffAbXL
  The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…
  ☆91Updated 6 months ago
• oxpig / AntiFold
  Improved antibody structure-based design using inverse folding
  ☆149Updated 3 weeks ago
• leeyang / DRfold
  ☆42Updated 2 years ago
• ai4protein / ProtSSN
  🧬 Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2…
  ☆79Updated 7 months ago
• LBM-EPFL / PeSTo
  Geometric deep learning method to predict protein binding interfaces from a protein structure.
  ☆151Updated 2 years ago
• uci-cbcl / esm-efficient
  Efficient implementatin of ESM family.
  ☆78Updated 3 months ago
• OpenProteinAI / PoET
  Inference code for PoET: A generative model of protein families as sequences-of-sequences
  ☆88Updated last year
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆113Updated 5 months ago
• zhanghaicang / carbonmatrix_public
  ☆119Updated this week
• westlake-repl / SaprotHub
  Making Protein Language Modeling Accessible to All Biologists
  ☆141Updated this week
• liuyf020419 / SCUBA-D
  ☆61Updated last year
• THUNLP-MT / dyMEAN
  This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"
  ☆124Updated 10 months ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆86Updated 3 weeks ago
• levinthal / Pallatom
  ☆132Updated 7 months ago
• evo-design / protein-dpo
  Aligning protein generative models with experimental fitness
  ☆114Updated 2 months ago
• Graylab / AlphaRED
  AlphaFold-initiated replica exchange protein docking
  ☆86Updated 7 months ago
• YuzheWangPKU / DiffPepBuilder
  Official repository for DiffPepBuilder and DiffPepDock tools
  ☆113Updated 2 months ago
• jproney / AF2Rank
  ☆114Updated 3 years ago
• TencentAI4S / HuDiff
  Code for humanization of antibody and nanobody
  ☆67Updated 4 months ago
• Graylab / GeoDock
  Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.
  ☆98Updated last year
• DeepGraphLearning / GearBind
  Pretrainable geometric graph neural network for antibody affinity maturation
  ☆70Updated 9 months ago
• idmjky / EvolvePro
  PLM based active learning model for protein engineering
  ☆84Updated last year
• westlake-repl / Denovo-Pinal
  Text-guided protein design
  ☆90Updated last month