☆15Jan 27, 2025Updated last year
Alternatives and similar repositories for alphafold3_for_rna
Users that are interested in alphafold3_for_rna are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- RNAdvisor is a docker-based wrapper that integrates other metrics and scoring functions for RNA 3D structure evaluation.☆18May 6, 2025Updated last year
- parKVFinder: thread-level parallel KVFinder☆16May 9, 2025Updated last year
- ☆16Aug 18, 2026Updated last month
- ☆13Jan 25, 2026Updated 8 months ago
- NuFold: End-to-End Approach for RNA Tertiary Structure Prediction with Flexible Nucleobase Center Representation☆55Oct 31, 2025Updated 10 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Gene Prediction using MAKER, CEGMA, SNAP, GENEMARK & AUGUSTUS☆10Jul 20, 2017Updated 9 years ago
- Histidine Protonation State Optimizer for setting up MD simulations based on semi-empirical QM resonance☆20Mar 6, 2026Updated 6 months ago
- RNA secondary structure prediction tool☆21Aug 25, 2026Updated last month
- Predicting RNA 3D structure and conformers using a pre-trained secondary structure model and structure-aware attention☆39Apr 21, 2026Updated 5 months ago
- Python Toolbox For Rosetta Silent Files Processing☆10Aug 2, 2021Updated 5 years ago
- ☆26Dec 6, 2025Updated 9 months ago
- Contact-based protein structure prediction☆10Feb 12, 2019Updated 7 years ago
- ☆14Oct 9, 2024Updated last year
- FlexPose, a framework for AI-based flexible modeling of protein-ligand binding pose.☆56Dec 27, 2023Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Nextflow pipeline for the computation of structure-based MSAs with AlphaFold2 models☆13Dec 20, 2022Updated 3 years ago
- Geometric deep learning of protein–DNA binding specificity☆80Mar 19, 2025Updated last year
- FoldBench is a low-homology benchmark spanning proteins, nucleic acids, ligands, and six major interaction types, enabling assessments th…☆154May 9, 2026Updated 4 months ago
- ☆27Feb 10, 2024Updated 2 years ago
- AI for Chemical Spectra☆19Updated this week
- Official release of OneGenome-Rice models.☆27Jun 16, 2026Updated 3 months ago
- Repository with materials for the Speeding Up Science Workshops at UC Davis☆10Oct 31, 2019Updated 6 years ago
- ☆35Jun 29, 2024Updated 2 years ago
- Simulation code for the prediction of RNA structures.☆14Jan 21, 2025Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Source code for the BUDE Alanine Scan web application.☆15May 27, 2025Updated last year
- reactive MD python pipeline for GROMACS using Kinetic Monte Carlo / Molecular Dynamics (KIMMDY)☆14Nov 19, 2019Updated 6 years ago
- Structure prediction of alternative protein conformations☆86Feb 24, 2025Updated last year
- Cloud-based molecular docking for everyone☆12Jul 1, 2024Updated 2 years ago
- Simple python interface for the OpenProtein.AI REST API.☆17Aug 22, 2026Updated last month
- A cyclic peptide-protein complex dataset derived from AFDB.☆68Mar 17, 2026Updated 6 months ago
- Integrative protein sequence design with evolutionary multiobjective optimization.☆13Jul 16, 2024Updated 2 years ago
- ParetoDrug☆12Sep 3, 2024Updated 2 years ago
- ☆15Jul 7, 2024Updated 2 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆31Aug 8, 2025Updated last year
- RNAFlow: RNA Structure & Sequence Design via Inverse Folding-Based Flow Matching☆86Aug 11, 2024Updated 2 years ago
- Code to perform scaffold hopping and virtual screening using WHALES descriptors.☆33Jan 12, 2021Updated 5 years ago
- Highly accurate and efficient deep learning paradigm for full-atom protein loop modeling with KarmaLoop☆16Jun 9, 2024Updated 2 years ago
- DFMDock (Denoising Force Matching Dock), a diffusion model that unifies sampling and ranking within a single framework.☆59Jul 22, 2025Updated last year
- ☆44May 22, 2024Updated 2 years ago
- Client only USCIS API case tracker☆24Jan 23, 2026Updated 8 months ago