EvryRNA / alphafold3_for_rnaLinks
☆13Updated 4 months ago
Alternatives and similar repositories for alphafold3_for_rna
Users that are interested in alphafold3_for_rna are comparing it to the libraries listed below
Sorting:
- RNAdvisor is a docker-based wrapper that integrates other metrics and scoring functions for RNA 3D structure evaluation.☆9Updated last month
- This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…☆42Updated 6 months ago
- code for SeqDance/ESMDance, biophysics-informed protein language models☆37Updated 2 months ago
- ☆35Updated 8 months ago
- ☆27Updated 5 months ago
- Code for the paper "Learning to engineer protein flexibility".☆18Updated 2 months ago
- Highly accurate and efficient deep learning paradigm for full-atom protein loop modeling with KarmaLoop☆12Updated 11 months ago
- InteractionGraphNet: a Novel and Efficient Deep Graph Representation Learning Framework for Accurate Protein-Ligand Interaction Predictio…☆30Updated 3 years ago
- Implementation of the Confidence Bootstrapping procedure for protein-ligand docking.☆26Updated last year
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆33Updated 6 months ago
- workflow used to prepare PPB-Affinity database☆22Updated 9 months ago
- Baseline model for PPB-Affinity benchmark data☆25Updated 2 weeks ago
- ☆23Updated 7 months ago
- Generative diverse protein backbones by protein language model☆32Updated 5 months ago
- Implementation of Protein Invariant Point Packer (PIPPack)☆32Updated last year
- Benchmarking code accompanying the release of `bioemu`☆30Updated last week
- 3D equivariant graph transformer for all-atom refinement of protein tertiary structures☆26Updated last year
- ☆31Updated 11 months ago
- PoseX: A Molecular Docking Benchmark☆38Updated this week
- ☆12Updated 6 months ago
- ☆18Updated 7 months ago
- Multi-target de novo molecular generator conditioned on AlphaFold's latent protein embeddings.☆65Updated 2 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆48Updated 2 weeks ago
- IDPFold test version☆20Updated 8 months ago
- Metrics for our protein design competitions.☆30Updated 7 months ago
- Versatile human antibody sequence design☆15Updated last week
- ☆32Updated last year
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆31Updated last year
- scripts to find PBD structures for cancer driver proteins☆31Updated 3 months ago
- Target-aware Variational Auto-encoders for Ligand Generation with Multimodal Protein Representation Learning☆30Updated last year