wengong-jin / DSMBindLinks
☆96Updated last year
Alternatives and similar repositories for DSMBind
Users that are interested in DSMBind are comparing it to the libraries listed below
Sorting:
- Sidechain conditioning and modeling for full-atom protein sequence design☆127Updated 3 weeks ago
- Diffusion model based protein-ligand flexible docking method☆115Updated last year
- Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)☆49Updated 2 months ago
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆84Updated last year
- ☆107Updated 2 years ago
- ☆65Updated 2 years ago
- PINDER: The Protein INteraction Dataset and Evaluation Resource☆142Updated last year
- Evaluating Protein Binding Interfaces with Transformer Networks☆46Updated 2 years ago
- Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)☆80Updated last year
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆158Updated this week
- Official repository for DiffPepBuilder and DiffPepDock tools☆110Updated last month
- Antibody-Antigen Docking and Affinity Benchmark☆75Updated 5 years ago
- ☆41Updated last year
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆46Updated last year
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆121Updated 9 months ago
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆78Updated 3 months ago
- Official Implemetation of ConfDiff (ICML'24) - Protein Conformation Generation via Force-Guided SE(3) Diffusion Models☆71Updated last year
- Pose checks for 3D Structure-based Drug Design methods☆92Updated last year
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆89Updated 6 months ago
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆96Updated 6 months ago
- ☆128Updated 6 months ago
- ☆83Updated 2 weeks ago
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆60Updated 2 years ago
- ☆78Updated last year
- Implementation of DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing☆88Updated 2 years ago
- A geometric flow matching model for generative protein-ligand docking and affinity prediction. (ISMB 2025)☆117Updated 3 months ago
- Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model (NeurIPS 2023 Poster)☆37Updated 2 years ago
- ☆225Updated 3 months ago
- A bunch of shell utilities for dealing the silent files☆72Updated last week
- Interpretable AI pipeline improving binding predictions for novel protein targets and ligands☆40Updated last year