wengong-jin / DSMBind
☆75Updated last month
Related projects ⓘ
Alternatives and complementary repositories for DSMBind
- Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)☆44Updated last month
- ☆105Updated last year
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆70Updated 5 months ago
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆48Updated last month
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆51Updated last year
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆93Updated 7 months ago
- ☆66Updated last year
- Official repository of EnzymeFlow☆59Updated last week
- PINDER: The Protein INteraction Dataset and Evaluation Resource☆92Updated last week
- Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)☆65Updated 8 months ago
- Diffusion model based protein-ligand flexible docking method☆92Updated 3 weeks ago
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆126Updated 2 months ago
- This repository implements Gibbs sampling with Graph-based Smoothing☆36Updated 5 months ago
- ☆30Updated last year
- ☆77Updated 8 months ago
- Fitness landscapes for antibodies☆51Updated 7 months ago
- Comprehensive benchmarking of protein-ligand structure generation methods (ICML 2024 AI4Science)☆85Updated this week
- Rotamer Density Estimator is an Unsupervised Learner of the Effect of Mutations on Protein-Protein Interaction (ICLR 2023)☆53Updated 5 months ago
- Dataset and package for working with protein-protein interactions in 3D☆85Updated last month
- ☆66Updated 3 weeks ago
- Pose checks for 3D Structure-based Drug Design methods☆73Updated 3 weeks ago
- Protein Ligand INteraction Dataset and Evaluation Resource☆166Updated this week
- ☆95Updated last year
- A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design☆94Updated last month
- Implementation of DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing☆75Updated 11 months ago
- Structure-conditioned masked language modeling for protein sequence design☆60Updated 9 months ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆83Updated 2 weeks ago
- ☆94Updated last month
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆24Updated 3 weeks ago
- ☆46Updated 5 months ago