wengong-jin / DSMBindLinks
☆92Updated 9 months ago
Alternatives and similar repositories for DSMBind
Users that are interested in DSMBind are comparing it to the libraries listed below
Sorting:
- Sidechain conditioning and modeling for full-atom protein sequence design☆114Updated last month
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆80Updated last year
- Diffusion model based protein-ligand flexible docking method☆108Updated 9 months ago
- ☆65Updated last year
- ☆106Updated 2 years ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆114Updated 5 months ago
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆139Updated last month
- ☆106Updated 2 months ago
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆60Updated last year
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆63Updated 2 months ago
- Evaluating Protein Binding Interfaces with Transformer Networks☆47Updated last year
- Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)☆45Updated 6 months ago
- Official Implemetation of ConfDiff (ICML'24) - Protein Conformation Generation via Force-Guided SE(3) Diffusion Models☆62Updated 10 months ago
- ☆186Updated 2 weeks ago
- PINDER: The Protein INteraction Dataset and Evaluation Resource☆131Updated 8 months ago
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆42Updated 8 months ago
- Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)☆77Updated last year
- Official repository for DiffPepBuilder and DiffPepDock tools☆94Updated last week
- Implementation of DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing☆89Updated last year
- [ICLR2025] Official Implementation of IgGM: A Generative Model for Functional Antibody and Nanobody Design☆75Updated 3 months ago
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆82Updated last month
- A bunch of shell utilities for dealing the silent files☆65Updated 2 months ago
- ☆78Updated last year
- ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)☆109Updated last year
- Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model (NeurIPS 2023 Poster)☆36Updated last year
- ☆40Updated last year
- ☆115Updated last month
- ☆49Updated last year
- Pose checks for 3D Structure-based Drug Design methods☆88Updated 9 months ago
- [NeurIPS 2023] DrugCLIP: Contrastive Protein-Molecule Representation Learning for Virtual Screening☆102Updated last year