wengong-jin / DSMBindLinks
☆91Updated 9 months ago
Alternatives and similar repositories for DSMBind
Users that are interested in DSMBind are comparing it to the libraries listed below
Sorting:
- Sidechain conditioning and modeling for full-atom protein sequence design☆110Updated 3 weeks ago
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆78Updated last year
- Diffusion model based protein-ligand flexible docking method☆106Updated 8 months ago
- ☆65Updated last year
- ☆106Updated 2 years ago
- ☆100Updated last month
- Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)☆45Updated 6 months ago
- Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)☆78Updated last year
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆59Updated last month
- PINDER: The Protein INteraction Dataset and Evaluation Resource☆127Updated 8 months ago
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆40Updated 7 months ago
- [ICLR2025] Official Implementation of IgGM: A Generative Model for Functional Antibody and Nanobody Design☆73Updated 2 months ago
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆131Updated last week
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆113Updated 4 months ago
- ☆170Updated last week
- Official repository of EnzymeFlow☆91Updated 7 months ago
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆60Updated last year
- Antibody-Antigen Docking and Affinity Benchmark☆72Updated 4 years ago
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆98Updated 11 months ago
- ☆39Updated last year
- Code for humanization of antibody and nanobody☆44Updated 7 months ago
- Evaluating Protein Binding Interfaces with Transformer Networks☆46Updated last year
- Aligning protein generative models with experimental fitness☆99Updated 2 months ago
- A geometric flow matching model for generative protein-ligand docking and affinity prediction. (ISMB 2025)☆95Updated 3 months ago
- Official Implemetation of ConfDiff (ICML'24) - Protein Conformation Generation via Force-Guided SE(3) Diffusion Models☆61Updated 10 months ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆60Updated 2 weeks ago
- 🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)☆83Updated last month
- Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model (NeurIPS 2023 Poster)☆36Updated last year
- ☆78Updated last year
- Implementation of PocketXMol, the pocket-interacting molecular generative foundation model.☆50Updated last month