wengong-jin / DSMBindLinks
☆89Updated 7 months ago
Alternatives and similar repositories for DSMBind
Users that are interested in DSMBind are comparing it to the libraries listed below
Sorting:
- Sidechain conditioning and modeling for full-atom protein sequence design☆106Updated 3 months ago
- Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)☆44Updated 4 months ago
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆75Updated 11 months ago
- ☆106Updated 2 years ago
- PINDER: The Protein INteraction Dataset and Evaluation Resource☆122Updated 6 months ago
- Diffusion model based protein-ligand flexible docking method☆105Updated 7 months ago
- ☆65Updated last year
- Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)☆77Updated last year
- ☆112Updated this week
- [ICLR2025] Official Implementation of IgGM: A Generative Model for Functional Antibody and Nanobody Design☆74Updated 3 weeks ago
- ☆94Updated this week
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆59Updated last year
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆36Updated 6 months ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆109Updated 3 months ago
- Code for humanization of antibody and nanobody☆42Updated 6 months ago
- Official repository of EnzymeFlow☆92Updated 5 months ago
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆48Updated 2 weeks ago
- Structure-conditioned masked language modeling for protein sequence design☆62Updated last year
- ☆41Updated last year
- Official repository for DiffPepBuilder and DiffPepDock tools☆92Updated this week
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆94Updated 10 months ago
- Official Implemetation of ConfDiff (ICML'24) - Protein Conformation Generation via Force-Guided SE(3) Diffusion Models☆58Updated 8 months ago
- Aligning protein generative models with experimental fitness☆96Updated 3 weeks ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆55Updated 2 weeks ago
- A geometric flow matching model for generative protein-ligand docking and affinity prediction. (ISMB 2025)☆91Updated last month
- Implementation of the Confidence Bootstrapping procedure for protein-ligand docking.☆26Updated last year
- Pose checks for 3D Structure-based Drug Design methods☆81Updated 7 months ago
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆123Updated last week
- Implementation of PocketXMol, the pocket-interacting molecular generative foundation model.☆45Updated 3 weeks ago
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆81Updated last week