Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)
☆113May 25, 2025Updated last year
Alternatives and similar repositories for PepFlowww
Users that are interested in PepFlowww are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆134Apr 16, 2025Updated last year
- Official repository for DiffPepBuilder and DiffPepDock tools☆134Oct 24, 2025Updated 11 months ago
- Codes for our paper "UniMoMo: Unified Generative Modeling of 3D Molecules for De Novo Binder Design" (ICML 2025)☆99Dec 7, 2025Updated 10 months ago
- This repository is the official code source of PPFlow: Target-Aware Peptide Design with Torsional Flow Matching (ICML2024)☆95May 17, 2025Updated last year
- ☆12Nov 16, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Fast protein backbone generation with SE(3) flow matching.☆329Jul 19, 2024Updated 2 years ago
- Diffusion-based all-atom protein generative model.☆239Aug 27, 2025Updated last year
- ☆41Mar 7, 2026Updated 7 months ago
- Reinforcement learning based cyclic peptide binder design☆20Jul 22, 2025Updated last year
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆100Jun 11, 2025Updated last year
- [ICLR 2025] Hotspot-Driven Peptide Design via Multi-Fragment Autoregressive Extension☆20May 5, 2025Updated last year
- Inpainting protein sequence and structure☆13Nov 10, 2023Updated 2 years ago
- ☆235Mar 2, 2024Updated 2 years ago
- ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)☆370Jun 29, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Official open-source of Antibody Design Using a Score-based Diffusion Model Guided by Evolutionary, Physical, and Geometric Constraints☆54Jun 30, 2025Updated last year
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆38Nov 7, 2024Updated last year
- ☆39Aug 28, 2023Updated 3 years ago
- In silico directed evolution of peptide binders with AlphaFold☆280Sep 25, 2026Updated 2 weeks ago
- FoldFlow: SE(3)-Stochastic Flow Matching for Protein Backbone Generation☆300Dec 10, 2024Updated last year
- ☆118Jan 3, 2026Updated 9 months ago
- ☆145Jun 3, 2025Updated last year
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆278Jul 24, 2025Updated last year
- Structure prediction and design of proteins with noncanonical amino acids☆147Feb 1, 2026Updated 8 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Public RFDiffusionAA repo☆490Jul 9, 2024Updated 2 years ago
- Implementation for SE(3) diffusion model with application to protein backbone generation☆425Jul 3, 2023Updated 3 years ago
- ☆15May 29, 2024Updated 2 years ago
- A Unified Evaluation Suite for Protein Design☆141Jan 27, 2026Updated 8 months ago
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆332Oct 28, 2024Updated last year
- A cyclic peptide-protein complex dataset derived from AFDB.☆68Mar 17, 2026Updated 6 months ago
- Joint Sequence-Structure Generation of Nucleic Acid and Protein Complexes with SE(3)-Discrete Diffusion☆59May 6, 2024Updated 2 years ago
- Codebase of the paper "Aligning Protein Conformation Ensemble Generation with Physical Feedback" (ICML 2025)☆18Jul 6, 2025Updated last year
- Code for humanization of antibody and nanobody☆97Aug 28, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆220Sep 24, 2024Updated 2 years ago
- Official implementation of CP-Composer. It is the released code of 《Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints》…☆33Aug 6, 2025Updated last year
- ☆63Aug 21, 2026Updated last month
- Improved antibody structure-based design using inverse folding☆176Sep 27, 2026Updated 2 weeks ago
- Code fo ICLR2025 paper "A Simple yet Effective DDG Predictor is An Unsupervised Antibody Optimizer and Explainer"☆25Jul 18, 2025Updated last year
- RNAFlow: RNA Structure & Sequence Design via Inverse Folding-Based Flow Matching☆86Aug 11, 2024Updated 2 years ago
- A partially latent flow matching model for the joint generation of a protein’s amino acid sequence and full atomistic structure, includin…☆312Sep 23, 2025Updated last year