QuKunLab / MultiomeBenchmarkingLinks
☆50Updated 9 months ago
Alternatives and similar repositories for MultiomeBenchmarking
Users that are interested in MultiomeBenchmarking are comparing it to the libraries listed below
Sorting:
- Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data☆57Updated last year
- ☆58Updated last year
- ☆18Updated 3 years ago
- Deciphering cell-cell communication from spatially resolved transcriptomic data at single-cell resolution with subgraph-based attentional…☆27Updated last year
- Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets☆33Updated 2 years ago
- ☆17Updated last year
- End-to-end analysis of spatial multi-omics data☆97Updated last month
- Python agent-based model tool for inference, visualization and analysis of cell-cell communication from single-cell data☆33Updated last week
- Matilda is a multi-task framework for learning from single-cell multimodal omics data. Matilda leverages the information from the multi-m…☆22Updated 6 months ago
- Repository for paper scMulan: a multitask generative pre-trained language model for single-cell analysis.☆60Updated last year
- ACTIONet single-cell analysis framework☆44Updated last year
- Predict RNA velocity through deep learning☆71Updated last year
- Gene group activity utility functions for Scanpy☆97Updated 11 months ago
- an integrative algorithm to distinguish spatially variable cell subclusters by reconstructing cells onto a pseudo space with spatial tran…☆23Updated 2 years ago
- A computational method to rank and infer drug-responsive cell population towards in-silico drug perturbation using a target-perturbed gen…☆61Updated last month
- ☆34Updated 7 months ago
- ☆30Updated 4 months ago
- ☆61Updated last year
- SIMBA: SIngle-cell eMBedding Along with features☆20Updated last year
- DIALOGUE is a dimensionality reduction method that uses cross-cell-type associations to identify multicellular programs (MCPs) and map th…☆115Updated last year
- ☆50Updated last month
- Additional code and analysis from the single-cell integration benchmarking project☆69Updated 2 years ago
- Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence☆39Updated 3 years ago
- ☆44Updated last year
- SIMBA: SIngle-cell eMBedding Along with features☆64Updated last year
- ☆119Updated 6 months ago
- PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.☆28Updated last year
- ☆43Updated 4 months ago
- CeLEry: cell location recovery in single-cell RNA sequencing☆35Updated 9 months ago
- cTPnet Package☆27Updated 3 years ago