ding-lab / ST_subclone_publicationLinks
Code for spatial subclone paper
☆14Updated 10 months ago
Alternatives and similar repositories for ST_subclone_publication
Users that are interested in ST_subclone_publication are comparing it to the libraries listed below
Sorting:
- Notebooks for generating figures in "Progressive Plasticity During Colorectal Cancer Metastasis"☆16Updated 11 months ago
- A computational tool for identification of 3D multi-modal spatial neighborhoods☆14Updated 3 months ago
- ☆21Updated 11 months ago
- Scanner of specific spatial patterns in tissues☆14Updated 3 years ago
- ☆17Updated 2 years ago
- A record of the analysis pipelines used to create the HTAPP data☆33Updated 7 months ago
- ☆16Updated 4 years ago
- Ordering gene-expression and functional events in single-cell experiments☆25Updated last year
- scMalignantFinder is a Python package specially designed for analyzing cancer single-cell RNA-seq datasets to distinguish malignant cells…☆15Updated last month
- R package of CSOmap(developing☆13Updated 3 years ago
- R package: ConDecon is a clustering-independent deconvolution method for estimating cell abundances in bulk tissues using single-cell RNA…☆13Updated last year
- ☆16Updated last year
- ☆27Updated 3 years ago
- cell type specific, trait-associated gene regulation☆29Updated 7 months ago
- The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data☆14Updated 2 years ago
- code for data processing and visualisation associated with the stromal subclasses manuscript☆13Updated 5 years ago
- Single-Cell Inference of Class Switch Recombination☆20Updated 2 weeks ago
- Ratio of the interferon-γ signature to the immunosuppression signature predicts anti-PD-1 therapy response in melanoma☆12Updated 2 years ago
- ☆17Updated 2 years ago
- ☆24Updated 2 years ago
- ☆17Updated last year
- ☆24Updated 2 years ago
- ☆29Updated 3 weeks ago
- Computational pipeline to process EasySci-RNA data.☆21Updated last year
- Scripts from the GBM cellular states paper☆20Updated 4 years ago
- ☆60Updated last year
- ☆23Updated 9 months ago
- We describe a transcriptional reference map of human natural killer (NK) cells based on analysis of scRNA-seq data from both blood and ti…☆14Updated last year
- UHCA☆11Updated 10 months ago
- ☆30Updated 6 months ago