broadchenf / Slide-tagsLinks
☆11Updated 2 years ago
Alternatives and similar repositories for Slide-tags
Users that are interested in Slide-tags are comparing it to the libraries listed below
Sorting:
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆30Updated 6 months ago
- RNA-velocity informed embeddings for visualizing cellular trajectories☆45Updated 3 years ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆27Updated 3 years ago
- Framework for Unified Single-Cell Analysis (FUSCA) is a software package for single-cell data analysis developed in R. At the moment, it …☆21Updated 2 years ago
- ☆31Updated 2 months ago
- ☆30Updated 4 months ago
- A record of the analysis pipelines used to create the HTAPP data☆33Updated 5 months ago
- ☆22Updated 2 years ago
- ☆20Updated 2 months ago
- R package: ConDecon is a clustering-independent deconvolution method for estimating cell abundances in bulk tissues using single-cell RNA…☆13Updated 11 months ago
- Notebooks for generating figures in "Progressive Plasticity During Colorectal Cancer Metastasis"☆16Updated 9 months ago
- Cell-type Relationship Analysis Workflow Done Across Distances☆38Updated 3 months ago
- Code used to process the data of the HBCA project☆32Updated last year
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆32Updated last year
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated 9 months ago
- R package expanding integrative analysis capabilities of Seurat by providing seamless access to popular integration methods and to an int…☆31Updated 3 weeks ago
- Inferring allele-specific copy number aberrations and tumor phylogeography from spatially resolved transcriptomics☆41Updated last month
- Trends in single cell papers☆16Updated last year
- ☆27Updated 3 weeks ago
- R tools for analysis and visualization of single-cell subclustering data☆17Updated 2 weeks ago
- Code to reproduce analyses and figures for Kamath et al., 2022☆11Updated 3 years ago
- ☆17Updated last year
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 11 months ago
- ☆20Updated 2 months ago
- ☆20Updated 5 months ago
- Scripts from the GBM cellular states paper☆19Updated 4 years ago
- cell type specific, trait-associated gene regulation☆27Updated 5 months ago
- ☆18Updated 2 years ago
- Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids☆29Updated 2 years ago
- ☆21Updated 9 months ago