Alternatives and similar repositories for scMODAL

Users that are interested in scMODAL are comparing it to the libraries listed below

• suinleelab / contrastiveVI
  ☆56Updated last year
• YangLabHKUST / Portal
  Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets
  ☆33Updated 2 years ago
• xianglin226 / scMDC
  Single Cell Multi-omics deep clustering
  ☆28Updated 3 months ago
• ArcInstitute / cell-load
  pytorch dataloaders for single-cell perturbation data
  ☆32Updated last week
• QuKunLab / MultiomeBenchmarking
  ☆50Updated 7 months ago
• cailab-tamu / scTenifoldNet
  A R/MATLAB package to construct and compare gene regulatory networks from single-cell transcriptomic data
  ☆24Updated 9 months ago
• jsxlei / SCALEX
  Online single-cell data integration through projecting heterogeneous datasets into a common cell-embedding space
  ☆79Updated last month
• jlakkis / sciPENN
  ☆18Updated 3 years ago
• ma-compbio / SpiceMix
  spatial transcriptome, single cell
  ☆71Updated 2 years ago
• PayamDiba / SERGIO
  A simulator for single-cell expression data guided by gene regulatory networks
  ☆68Updated last year
• altoslabs / perturbench
  ☆43Updated 2 weeks ago
• aristoteleo / Scribe-py
  Regulatory networks with Direct Information in python
  ☆40Updated 2 years ago
• const-ae / linear_perturbation_prediction-Paper
  ☆56Updated 3 months ago
• theislab / scib-reproducibility
  Additional code and analysis from the single-cell integration benchmarking project
  ☆67Updated 2 years ago
• bowang-lab / DeepVelo
  ☆46Updated last year
• JSB-UCLA / scDesign2
  An interpretable simulator that generates realistic single-cell gene expression count data with gene correlations recapitulated
  ☆25Updated 11 months ago
• vandijklab / CINEMA-OT
  ☆34Updated 6 months ago
• QSong-github / scGCN
  scGCN is a graph convolutional networks algorithm for knowledge transfer in single cell omics
  ☆41Updated 3 years ago
• hui2000ji / scETM
  A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data.
  ☆53Updated 3 years ago
• theislab / scTab
  ☆61Updated last year
• Su-informatics-lab / DSTG
  Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence
  ☆39Updated 3 years ago
• TencentAILabHealthcare / scTranslator
  ☆37Updated 2 months ago
• SONGDONGYUAN1994 / scDesign3
  scDesign3 generates realistic in silico data for multimodal single-cell and spatial omics
  ☆106Updated last month
• YangLabHKUST / STitch3D
  Construction of a 3D whole organism spatial atlas by joint modeling of multiple slices
  ☆69Updated last year
• KrishnaswamyLab / MELD
  Quantifying experimental perturbations at single cell resolution
  ☆110Updated last year
• jzhoulab / quasildr
  Quasilinear data representations for single-cell omics data analysis
  ☆43Updated 2 years ago
• klarman-cell-observatory / scPhere
  ☆102Updated 2 years ago
• datapplab / AutoClass
  ☆44Updated 3 years ago
• HantaoShu / DeepSEM
  ☆85Updated 2 years ago
• Teichlab / MultiMAP
  MultiMAP for integration of single cell multi-omics
  ☆56Updated last year