scMODAL: A general deep learning framework for single-cell Multi-Omics Data Alignment with feature Links
☆23Jun 10, 2025Updated 11 months ago
Alternatives and similar repositories for scMODAL
Users that are interested in scMODAL are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Construction of a 3D whole organism spatial atlas by joint modeling of multiple slices☆71Nov 20, 2023Updated 2 years ago
- A computational tool for identification of 3D multi-modal spatial neighborhoods☆15Aug 1, 2025Updated 9 months ago
- This is the code used for the paper "PMGT-VR: A decentralized proximal-gradient algorithmic framework with variance reduction", prepint.☆16Jul 2, 2022Updated 3 years ago
- R package VCM contains three approaches for solving variance components model: PX-EM algorithm, MM algorithm and Method of Moments☆16Mar 6, 2025Updated last year
- Cross-population analysis using GWAS summary statistics☆19Jun 25, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Modeling and predicting single-cell multi-gene perturbation responses with scLAMBDA☆26Mar 20, 2026Updated 2 months ago
- This repository contains data and other materials related to the DeepPT manuscript☆18Mar 12, 2024Updated 2 years ago
- A Deep Learning-Based Model for the integration, cross-dataset cross-modality generation, self augmentation and matched multi-omics simul…☆16Aug 9, 2025Updated 9 months ago
- Single cell proteomics data processing☆32Apr 6, 2026Updated last month
- A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models☆79May 24, 2024Updated 2 years ago
- ☆137Feb 13, 2025Updated last year
- Deciphering cell-cell communication from spatially resolved transcriptomic data at single-cell resolution with subgraph-based attentional…☆29Sep 6, 2024Updated last year
- Numerical experiments for nested cross-validation paper☆14Jun 10, 2022Updated 3 years ago
- Code for spatial subclone paper☆18Jan 23, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets☆33Jul 13, 2023Updated 2 years ago
- BioContextAI Knowledgebase MCP server for biomedical agentic AI☆23Jan 12, 2026Updated 4 months ago
- Nextflow pipeline to re-process all public single-cell RNA-seq data☆33Jul 9, 2025Updated 10 months ago
- Flexible Integration of single-cell RNA-sequencing data for large-scale Multi-tissue cell atlas datasets☆13Sep 20, 2022Updated 3 years ago
- Causal discovery of gene regulatory programs from single-cell genomics☆19Sep 5, 2025Updated 8 months ago
- Mendelian Randomization accounting for Pleiotropy and Sample Structure using genome-wide summary statistics☆43Apr 30, 2026Updated 3 weeks ago
- Model Context Protocol (MCP)☆17Mar 25, 2025Updated last year
- A versatile single-cell cross-modality translation method via dual-aligned variational autoencoders