Interactive visualisation of CellphoneDB results
☆12Jan 15, 2025Updated last year
Alternatives and similar repositories for cellphonedbviz
Users that are interested in cellphonedbviz are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Repo with analysis code for the vascular atlas paper☆10Nov 22, 2024Updated last year
- Fast algorithms for GLM-PCA.☆14Mar 12, 2025Updated last year
- Single cell omics biology annotations☆54Feb 26, 2026Updated last month
- SCeptre is a python package that extends the functionalities of Scanpy to analyze multiplexed single-cell proteomics data.☆18Mar 18, 2024Updated 2 years ago
- SCAN2 is a somatic SNV and indel genotyper for single cells amplified by Primary Template-Directed Amplification (PTA)☆17Jul 28, 2025Updated 8 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- ☆47Jan 28, 2026Updated 2 months ago
- Integrating long read sequencing enhances short read-based locus-specific transposable element quantification☆10May 12, 2025Updated 10 months ago
- Somatic coding and non-coding mutation enrichment analysis for tumor WGS data☆12Jun 16, 2021Updated 4 years ago
- ☆19Feb 5, 2025Updated last year
- A set of files to do genomics analysis on python☆18Jun 5, 2025Updated 9 months ago
- Cellsnake tool main repo☆36Feb 22, 2024Updated 2 years ago
- ☆23Feb 2, 2025Updated last year
- R package for computing Association Plots☆17Nov 4, 2024Updated last year
- Aligning gene expression trajectories of single-cell reference and query systems☆83Aug 10, 2025Updated 7 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- scAR (single-cell Ambient Remover) is a deep learning model for removal of the ambient signals in droplet-based single cell omics☆59Aug 17, 2024Updated last year
- Integration of gut cell atlases☆35Oct 29, 2025Updated 5 months ago
- Single sample Gene Set Enrichment analysis (ssGSEA) and PTM Enrichment Analysis (PTM-SEA)☆13Jan 27, 2023Updated 3 years ago
- Trends in single cell papers☆17Sep 23, 2024Updated last year
- ☆10Jul 9, 2024Updated last year
- PTa Analysis TOolkit☆15Mar 2, 2026Updated 3 weeks ago
- ☆10Jan 24, 2021Updated 5 years ago
- scVI extension for unspliced RNA☆15May 18, 2025Updated 10 months ago
- ☆13Jun 6, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- ☆13Aug 9, 2022Updated 3 years ago
- Tool for analyzing the inter-mutational distances between SNV-SNV and INDEL-INDEL mutations. Tool separates mutations into clustered and …☆14Feb 26, 2026Updated last month
- A tissue-specific single-cell biological age model☆13Jul 26, 2023Updated 2 years ago
- ☆13Feb 12, 2026Updated last month
- A python implementation of scran computeSumFactors: normalization by deconvolution for single-cell RNA-sequencing☆33Nov 4, 2023Updated 2 years ago
- ☆18Jul 30, 2022Updated 3 years ago
- Translates an AnnData object with mouse gene symbols into one with human gene symbols by mapping orthologs from biomart.☆29Jun 10, 2025Updated 9 months ago
- Python package to interactively annotate histological images within a jupyter notebook☆18Oct 20, 2025Updated 5 months ago
- Python code for cross-condition label refinement in single-cell data with HiDDEN☆14Sep 21, 2024Updated last year
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- MultiMAP for integration of single cell multi-omics☆55Nov 15, 2023Updated 2 years ago
- Identify major cellular signals in bulk transcriptomes☆11Jun 1, 2022Updated 3 years ago
- ☆20Feb 27, 2026Updated last month
- Significance analysis for clustering single-cell RNA-sequencing data☆123Sep 7, 2024Updated last year
- Ultrafast method to compute single-sample gene set enrichment scores for gene expression or proteomics data☆21Feb 10, 2026Updated last month
- An implementation of the Poker Game Guandan popular among Jiangsu and Anhui in China☆11Jan 14, 2023Updated 3 years ago
- Python package to predict enhancer-gene interactions supervised on CRISPRi data☆15Nov 21, 2023Updated 2 years ago