SegmenTation Analysis by ParaLlelization of 3D Datasets
☆12Feb 22, 2024Updated 2 years ago
Alternatives and similar repositories for STAPL3D
Users that are interested in STAPL3D are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R package for generalized binary covariance decomposition.☆16Jul 13, 2025Updated 10 months ago
- Perturbation-response Score (PS) analysis is a method to quantify diverse perturbation responses and discover novel biological insights i…☆17Apr 20, 2024Updated 2 years ago
- ☆12Apr 13, 2023Updated 3 years ago
- ☆13Feb 4, 2020Updated 6 years ago
- CellWalkR: An R Package for integrating single-cell and bulk data to resolve regulatory elements☆22Oct 8, 2025Updated 7 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Python based viewer for large mulit-dimensional datasets.☆20Jan 28, 2020Updated 6 years ago
- ☆27Mar 12, 2026Updated 2 months ago
- ☆23Apr 17, 2020Updated 6 years ago
- Quasilinear data representations for single-cell omics data analysis☆43May 4, 2023Updated 3 years ago
- An Interactive Image Segmentation Filter for Multiplex Microscopy☆32Apr 9, 2026Updated last month
- Alistair Moffat fan page☆16Aug 29, 2022Updated 3 years ago
- MACA: Marker-based automatic cell-type annotation for single cell expression data☆25Jul 12, 2023Updated 2 years ago
- The Single-Cell Pathology Landscape of Breast Cancer☆27Jan 14, 2020Updated 6 years ago
- Android RKNN demo app runs YOLOv5☆18Apr 7, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11Mar 31, 2026Updated last month
- LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.☆20Aug 10, 2023Updated 2 years ago
- Multi-modal single cell analysis pipelines☆63Dec 11, 2025Updated 5 months ago
- Combined clonality and transcriptome scRNAseq clustering method☆11Dec 3, 2022Updated 3 years ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆33Jan 30, 2026Updated 3 months ago
- Library for managing, storage, viewing, and working with spatial transcriptomics data using Imglib2, N5, BigDataViewer and Fiji.☆32May 27, 2025Updated 11 months ago
- ☆18Feb 18, 2025Updated last year
- Implementation of entropy of mixing algorithm in python☆10Oct 19, 2022Updated 3 years ago
- Organoid Localization and Quantification Using Deep Convolutional Neural Networks☆30Jan 22, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆12Jun 2, 2021Updated 4 years ago
- ☆11Apr 25, 2026Updated 3 weeks ago
- scMalignantFinder is a Python package specially designed for analyzing cancer single-cell RNA-seq datasets to distinguish malignant cells…☆20May 13, 2026Updated last week
- Learning-based Inference of Longitudinal imAge Changes (LILAC)☆18Apr 22, 2026Updated 3 weeks ago
- Code to reproduce analysis of Milo manuscript☆15Aug 3, 2022Updated 3 years ago
- ☆11Feb 11, 2021Updated 5 years ago
- ☆17May 8, 2026Updated last week
- Analysis code for the TAP-seq manuscript.☆11Jun 25, 2021Updated 4 years ago
- Learning Sheared EPI Structure for Light Field Reconstruction☆15May 16, 2019Updated 7 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Histopathology Feature Extractors (2024)☆14Jun 14, 2024Updated last year
- ☆10Dec 4, 2023Updated 2 years ago
- ☆12Jun 11, 2023Updated 2 years ago
- cross-species analysis of cell identities, markers and regulations☆12Jul 11, 2025Updated 10 months ago
- ☆14Feb 12, 2026Updated 3 months ago
- Single Cell Pretrained Regulatory network INference from Transcripts☆11Sep 17, 2024Updated last year
- A napari plugin for itk-elastix☆42Feb 16, 2026Updated 3 months ago