SegmenTation Analysis by ParaLlelization of 3D Datasets
☆12Feb 22, 2024Updated 2 years ago
Alternatives and similar repositories for STAPL3D
Users that are interested in STAPL3D are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆15Jul 26, 2026Updated 2 weeks ago
- R package for generalized binary covariance decomposition.☆16Jul 13, 2025Updated last year
- Perturbation-response Score (PS) analysis is a method to quantify diverse perturbation responses and discover novel biological insights i…☆17Apr 20, 2024Updated 2 years ago
- ☆12Apr 13, 2023Updated 3 years ago
- ☆13Feb 4, 2020Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- CellWalkR: An R Package for integrating single-cell and bulk data to resolve regulatory elements☆22Oct 8, 2025Updated 10 months ago
- Python based viewer for large mulit-dimensional datasets.☆20Jan 28, 2020Updated 6 years ago
- Group Technical Effects (GTE)☆16Oct 18, 2025Updated 9 months ago
- ☆28Mar 12, 2026Updated 4 months ago
- ☆23Apr 17, 2020Updated 6 years ago
- Quasilinear data representations for single-cell omics data analysis☆42May 4, 2023Updated 3 years ago
- An Interactive Image Segmentation Filter for Multiplex Microscopy☆35Updated this week
- Alistair Moffat fan page☆16Aug 29, 2022Updated 3 years ago
- The Single-Cell Pathology Landscape of Breast Cancer☆28Jan 14, 2020Updated 6 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Android RKNN demo app runs YOLOv5☆19Apr 7, 2024Updated 2 years ago
- MACA: Marker-based automatic cell-type annotation for single cell expression data☆25Jul 12, 2023Updated 3 years ago
- Multi-modal single cell analysis pipelines☆63Dec 11, 2025Updated 7 months ago
- LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.☆20Aug 10, 2023Updated 2 years ago
- Combined clonality and transcriptome scRNAseq clustering method☆11Dec 3, 2022Updated 3 years ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆33Jan 30, 2026Updated 6 months ago
- Library for managing, storage, viewing, and working with spatial transcriptomics data using Imglib2, N5, BigDataViewer and Fiji.☆32May 27, 2025Updated last year
- Organoid Localization and Quantification Using Deep Convolutional Neural Networks☆30Jan 22, 2022Updated 4 years ago
- Learning Sheared EPI Structure for Light Field Reconstruction☆15May 16, 2019Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Implementation of entropy of mixing algorithm in python☆10Oct 19, 2022Updated 3 years ago
- ☆12Jun 2, 2021Updated 5 years ago
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11Mar 31, 2026Updated 4 months ago
- Vignettes for Cardinal3 paper☆10Feb 20, 2023Updated 3 years ago
- Histopathology Feature Extractors (2024)☆14Jun 14, 2024Updated 2 years ago
- ☆12Apr 25, 2026Updated 3 months ago
- Cell image classsification with neural networks (MLP, ConvNet) and other statistical ML models (SVM, LDA, LR, etc.).☆27Jan 31, 2020Updated 6 years ago
- ☆11Feb 11, 2021Updated 5 years ago
- Analysis code for the TAP-seq manuscript.☆11Jun 25, 2021Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆10Dec 4, 2023Updated 2 years ago
- ☆12Jun 11, 2023Updated 3 years ago
- A napari plugin for itk-elastix☆42Feb 16, 2026Updated 5 months ago
- Single Cell Pretrained Regulatory network INference from Transcripts☆11Sep 17, 2024Updated last year
- cross-species analysis of cell identities, markers and regulations☆13Jul 11, 2025Updated last year
- ☆14Apr 4, 2023Updated 3 years ago
- R package for single-cell comparative regulatory analysis☆12Jun 26, 2021Updated 5 years ago