epigen / scifiRNA-seq
☆12Updated 4 years ago
Alternatives and similar repositories for scifiRNA-seq:
Users that are interested in scifiRNA-seq are comparing it to the libraries listed below
- scover☆23Updated last year
- Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis☆32Updated 3 years ago
- Analysis pipeline for our circSC manuscript☆12Updated 2 years ago
- ☆12Updated 3 years ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆25Updated last year
- Dingpw / Endothelial-Cell-Heterogeneity-and-Microglia-Regulons-Revealed-by-A-Pig-Cell-Landscape-at-Single-cel☆15Updated 2 years ago
- Isoform co-usage networks from single-cell RNA-seq data☆15Updated last year
- The million-scale method for single-cell analysis☆10Updated last year
- Allele-Specific Expression by Single-Cell RNA Sequencing☆28Updated 4 years ago
- Suite of analysis tools for spatial total RNA-sequencing☆11Updated last year
- Toolkit for single-cell copy number analysis☆19Updated 5 months ago
- single-cell analysis workflows for double phosphoramidite barcode and UMI Correction (scCOLOR-seq)☆13Updated last year
- Code and data from Koche et al. Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma (2020)☆15Updated 4 years ago
- ☆45Updated 7 months ago
- dropseq-based single nuclei genomic accessibility and RNA expression (SNARE-seq) preprocessing pipeline☆9Updated 5 years ago
- ☆16Updated 9 months ago
- ☆18Updated last year
- Analysis repository for "Droplet-based combinatorial indexing for massive scale single-cell epigenomics"☆10Updated 5 years ago
- Transposable element expression at unique loci in single cells with CELLO-seq☆8Updated 9 months ago
- ☆20Updated last year
- epigenome analysis to rank transcription factors☆13Updated 5 years ago
- ☆19Updated 9 months ago
- RAGE-seq scripts☆18Updated 3 years ago
- Comprehensive pipeline for donor demultiplexing in single cell☆24Updated 9 months ago
- ☆17Updated 4 years ago
- R Package for phasing of single cell Strand-seq data☆10Updated 2 months ago
- ☆18Updated 4 years ago
- single-cell Hi-C, scHi-C, Hi-C, 3D genome, nuclear organization, tensor decomposition☆19Updated last year
- ☆8Updated 3 years ago
- Analyzing chromatin accessibility data in R☆18Updated last year