epigen / scifiRNA-seqLinks
☆12Updated 4 years ago
Alternatives and similar repositories for scifiRNA-seq
Users that are interested in scifiRNA-seq are comparing it to the libraries listed below
Sorting:
- ☆22Updated 11 months ago
- Allele-Specific Expression by Single-Cell RNA Sequencing☆28Updated 4 years ago
- Analyzing chromatin accessibility data in R☆18Updated last year
- Isoform co-usage networks from single-cell RNA-seq data☆16Updated last year
- scover☆23Updated last year
- Analysis pipeline for our circSC manuscript☆13Updated 3 years ago
- ☆20Updated last year
- ☆17Updated last year
- ☆12Updated 4 years ago
- Dingpw / Endothelial-Cell-Heterogeneity-and-Microglia-Regulons-Revealed-by-A-Pig-Cell-Landscape-at-Single-cel☆15Updated 2 years ago
- Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis☆33Updated 3 years ago
- Analysis repository for "Droplet-based combinatorial indexing for massive scale single-cell epigenomics"☆11Updated 5 years ago
- ☆10Updated 3 years ago
- epigenome analysis to rank transcription factors☆13Updated 5 years ago
- Code and data from Koche et al. Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma (2020)☆15Updated 4 years ago
- Uncertainty-aware quantification of Transposable Elements expression in scRNA-seq☆17Updated 2 months ago
- ☆17Updated 2 years ago
- Dynamic Analysis of Alternative Polyadenylation from single-cell RNA-seq (scDaPars)☆15Updated 4 years ago
- ☆19Updated last year
- Mitochondrial Alteration Enrichment and Genome Analysis Toolkit☆19Updated last year
- Snakemake pipeline for microexon discovery and quantification☆20Updated 4 months ago
- ☆12Updated 5 years ago
- NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.☆19Updated 2 years ago
- A toolset for handling sequencing data with unique molecular identifiers (UMIs)☆15Updated 6 years ago
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated last year
- RAGE-seq scripts☆18Updated 3 years ago
- ☆23Updated 2 years ago
- ☆17Updated 2 years ago
- SigProfilerTopography allows evaluating the effect of chromatin organization, histone modifications, transcription factor binding, DNA re…☆19Updated 3 months ago
- Transposable element expression at unique loci in single cells with CELLO-seq☆8Updated 11 months ago