epigen / scifiRNA-seq
☆11Updated 3 years ago
Related projects ⓘ
Alternatives and complementary repositories for scifiRNA-seq
- ☆10Updated 2 years ago
- Analyzing chromatin accessibility data in R☆18Updated last year
- scover☆22Updated last year
- Dingpw / Endothelial-Cell-Heterogeneity-and-Microglia-Regulons-Revealed-by-A-Pig-Cell-Landscape-at-Single-cel☆15Updated 2 years ago
- ☆16Updated last year
- A toolset for handling sequencing data with unique molecular identifiers (UMIs)☆15Updated 6 years ago
- ☆12Updated 3 years ago
- ☆20Updated last year
- Analysis pipeline for our circSC manuscript☆12Updated 2 years ago
- Analysis repository for "Droplet-based combinatorial indexing for massive scale single-cell epigenomics"☆10Updated 5 years ago
- epigenome analysis to rank transcription factors☆13Updated 4 years ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆24Updated 9 months ago
- Toolkit for single-cell copy number analysis☆18Updated 3 weeks ago
- The million-scale method for single-cell analysis☆10Updated last year
- ☆15Updated 5 months ago
- ☆11Updated 5 years ago
- cross-species analysis of cell identities, markers and regulations☆12Updated last week
- ☆12Updated 2 years ago
- SCASA: Single cell transcript quantification tool☆19Updated 11 months ago
- Suite of analysis tools for spatial total RNA-sequencing☆11Updated last year
- Normalization for single cell RNA-seq data☆9Updated 2 years ago
- single-cell analysis workflows for double phosphoramidite barcode and UMI Correction (scCOLOR-seq)☆13Updated last year
- Code and data from Koche et al. Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma (2020)☆14Updated 4 years ago
- ☆40Updated 3 months ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆20Updated 7 months ago
- TRUST4 manuscript evaluation☆14Updated 2 years ago
- Allele-Specific Expression by Single-Cell RNA Sequencing☆28Updated 4 years ago
- dropseq-based single nuclei genomic accessibility and RNA expression (SNARE-seq) preprocessing pipeline☆9Updated 5 years ago
- R package for haplotype phasing using single-cell RNA-seq data☆13Updated 7 years ago
- A record of the analysis pipelines used to create the HTAPP data☆19Updated this week