epigen / scifiRNA-seqLinks
☆12Updated 4 years ago
Alternatives and similar repositories for scifiRNA-seq
Users that are interested in scifiRNA-seq are comparing it to the libraries listed below
Sorting:
- ☆12Updated 4 years ago
- TRUST4 manuscript evaluation☆15Updated 3 years ago
- Transposable element expression at unique loci in single cells with CELLO-seq☆10Updated last year
- ☆12Updated 2 years ago
- Dingpw / Endothelial-Cell-Heterogeneity-and-Microglia-Regulons-Revealed-by-A-Pig-Cell-Landscape-at-Single-cel☆15Updated 3 years ago
- Code and data from Koche et al. Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma (2020)☆15Updated 4 years ago
- Paired-seq☆14Updated last year
- Scripts and notebooks used in Akgol Oksuz et al. paper☆11Updated 4 years ago
- single-cell analysis workflows for double phosphoramidite barcode and UMI Correction (scCOLOR-seq)☆13Updated 2 years ago
- ☆10Updated 3 years ago
- A pipeline for Smooth-seq data analysis.☆10Updated 4 years ago
- Suite of analysis tools for spatial total RNA-sequencing☆12Updated 2 years ago
- Analysis pipeline for our circSC manuscript☆14Updated 3 years ago
- The million-scale method for single-cell analysis☆10Updated 2 years ago
- Predicting TF sequence-specificity similarity with weighted alignments☆13Updated 6 years ago
- Computational analyses of WGS, mate-pair, RNA-seq, Hi-C and Capture-C data from highly rearranged balancer chromosomes in Drosophila mela…☆10Updated 6 years ago
- ScisorWiz: Differential Isoform Visualizer for Long-Read RNA Sequencing Data☆17Updated last year
- scover☆24Updated last year
- A toolset for handling sequencing data with unique molecular identifiers (UMIs)☆16Updated 7 years ago
- Analysis repository for "Droplet-based combinatorial indexing for massive scale single-cell epigenomics"☆11Updated 6 years ago
- R Package for phasing of single cell Strand-seq data☆10Updated 9 months ago
- Snakemake pipeline for microexon discovery and quantification☆20Updated 9 months ago
- Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis☆35Updated 3 years ago
- SigProfilerTopography allows evaluating the effect of chromatin organization, histone modifications, transcription factor binding, DNA re…☆21Updated 2 months ago
- Repo for generating custom blacklist for reads originating from mitochondrial DNA to nuclear genome☆22Updated 3 years ago
- ☆11Updated 7 years ago
- Perturb-seq analysis package☆14Updated last year
- ☆18Updated 2 years ago
- SMILE: Mutual Information Learning for Integration of Single Cell Omics Data☆11Updated 2 years ago
- ☆25Updated 3 years ago