Software to process, statistically analyse and visualise deep mutational scanning data
☆14Oct 29, 2025Updated 4 months ago
Alternatives and similar repositories for mutscan
Users that are interested in mutscan are comparing it to the libraries listed below
Sorting:
- An error model and pipeline for analyzing deep mutational scanning (DMS) data and diagnosing common experimental pathologies☆39Sep 16, 2025Updated 6 months ago
- An online database of variants functionally demonstrated to affect (or not affect) splicing.☆11Mar 20, 2025Updated last year
- Pipeline to filter whole exome vcf files and generate a report document for clinical diagnostics.☆14Nov 11, 2019Updated 6 years ago
- Accessing AlphaMissense Data Resources in R☆13Nov 26, 2025Updated 3 months ago
- Phylogenetic pathway–dependent recognition of fixed substitutions and parallel mutations☆11Sep 18, 2025Updated 6 months ago
- ☆15Mar 15, 2023Updated 3 years ago
- Published at Bioinformatics☆12Jul 4, 2024Updated last year
- A Python API for estimating statistical high-order epistasis in genotype-phenotype maps.☆38Aug 18, 2023Updated 2 years ago
- ☆12Nov 1, 2022Updated 3 years ago
- An information model for representing variant annotations.☆27Mar 12, 2026Updated last week
- ☆10Dec 22, 2025Updated 2 months ago
- MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect☆29Mar 12, 2026Updated last week
- Nanopore UMI-linked consensus sequencing☆16Feb 11, 2021Updated 5 years ago
- Interpretable genotype-phenotype landscape modeling☆36Dec 3, 2023Updated 2 years ago
- Data processing and analysis scripts for our spatial profiling of embryos using seqFISH☆16Feb 10, 2023Updated 3 years ago
- A portable, flexible, parallelized tool for complete processing of massively parallel reporter assay data☆35Jan 6, 2025Updated last year
- ☆15Oct 7, 2025Updated 5 months ago
- Package to extend Airflow functionality with CWL v1.0 support☆12Jun 12, 2019Updated 6 years ago
- Protein scoring and sampling of 'Combinatorial Variant Effects from Structure' (CoVES)☆11Jan 5, 2024Updated 2 years ago
- Tool for estimating growth rates from microbial growth curves☆31Feb 4, 2026Updated last month
- A single-cell transcriptomic analysis of endometriosis, endometriomas, eutopic endometrial samples and uninvolved ovary tissues highlight…☆18Jan 12, 2023Updated 3 years ago
- This is the BWA workflow used in the PanCancer project used to allign all the BAM files.☆11Dec 27, 2022Updated 3 years ago
- ☆20May 24, 2025Updated 9 months ago
- An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline☆70Mar 23, 2025Updated 11 months ago
- Infer metadata for your downstream analysis straight from your RNA-Seq data☆15Nov 20, 2024Updated last year
- Real time monitor for snakemake☆16Mar 4, 2026Updated 2 weeks ago
- ☆26May 9, 2022Updated 3 years ago
- ☆14Dec 10, 2018Updated 7 years ago
- ☆18Mar 27, 2024Updated last year
- Reference-free analysis of genetic architecture☆22Sep 21, 2024Updated last year
- Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…☆56Apr 10, 2025Updated 11 months ago
- Epidemiological modeling framework for pathogen population genetics and evolution.☆18Oct 7, 2024Updated last year
- ChIA-PET Utilities☆13Dec 19, 2021Updated 4 years ago
- ☆21Dec 26, 2025Updated 2 months ago
- Simulate short-reads datasets using probabilistic models☆11Jun 1, 2013Updated 12 years ago
- Quality control for phylogenetic analyses☆13Updated this week
- Integrating influenza antigenic dynamics with molecular evolution☆12May 28, 2015Updated 10 years ago
- PISCES is a pipeline for rapid transcript quantitation, genetic fingerprinting, and quality control assessment of RNAseq libraries using …☆30Jun 17, 2025Updated 9 months ago
- Python tools for Morse Smale Complex analysis and visualization☆14Nov 10, 2021Updated 4 years ago