Alternatives and similar repositories for mutscan

Users that are interested in mutscan are comparing it to the libraries listed below

• pachterlab / qcbc
  ☆19Updated last week
• kuijjerlab / PySNAIL
  Smooth-quantile Normalization Adaptation for Inference of co-expression Links
  ☆16Updated 2 years ago
• matsengrp / sumrep
  Summary statistics for repertoires
  ☆17Updated 2 years ago
• pachterlab / RMEJLBASBMP_2024
  Repository for the paper "The impact of package selection and versioning on single-cell RNA-seq analysis"
  ☆18Updated 3 months ago
• IxI-97 / BiomiX
  R tool to analyse and integrate multiple -omics data
  ☆12Updated last month
• matsengrp / phippery
  ☆18Updated 6 months ago
• jsalignon / cactus
  Chromatin ACcessibility and Transcriptomics Unifying Software
  ☆16Updated 7 months ago
• slowkow / hlabud
  🐶 hlabud: HLA genotype analysis in R
  ☆16Updated last month
• broadinstitute / mix_seq_ms
  Code associated with MIX-seq manuscript
  ☆15Updated 4 years ago
• evanpeikon / SmallSeqFlow
  SmallSeqFlow: A streamlined, notebook-based bulk RNA-seq analysis pipeline optimized for small-sample studies with modular extensions.
  ☆12Updated 3 months ago
• hase62 / Neoantimon
  Published at Bioinformatics
  ☆12Updated 11 months ago
• andrewGhazi / malacoda
  Bayesian analysis of MPRA and other high-throughput genomic assays
  ☆10Updated 4 years ago
• saezlab / flop
  FunctionaL Omics Processing platform
  ☆13Updated 10 months ago
• athchen / beer
  Bayesian enrichment estimation in R
  ☆11Updated 2 years ago
• kuijjerlab / retriever
  Generate Robust Disease-Specific Response Signatures from the LINCS-L1000 Data
  ☆15Updated 3 years ago
• EvaYiwenWang / Managing_batch_effects
  ☆13Updated 2 years ago
• ELELAB / MoonlightR
  ☆17Updated last year
• benoukraflab / TFregulomeR-old
  TFregulomeR reveals transcription factors’ context-specific features and functions
  ☆16Updated 3 years ago
• Immunotools / IgDetective
  a tool for annotation of immunoglobulin genes in genome assemblies
  ☆11Updated 3 months ago
• de-Boer-Lab / MAUDE
  Mean Alterations Using Discrete Expression
  ☆14Updated last year
• icbi-lab / NeoFuse
  NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.
  ☆19Updated 2 years ago
• matsengrp / phip-flow
  A Nextflow pipeline to align, merge, and organize large PhIP-Seq datasets
  ☆12Updated 3 months ago
• Illumina / PromoterAI
  ☆25Updated this week
• rargelaguet / thesis
  University of Cambridge PhD thesis
  ☆15Updated 4 years ago
• mikelove / zinbwave-deseq2
  Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq
  ☆31Updated 4 years ago
• PoolLab / ReferenceEnhancer
  ☆20Updated last year
• lasersonlab / phip-stat
  Analysis tools for PhIP-seq experiments
  ☆12Updated 3 years ago
• h-samee / shape-motif
  ☆10Updated 6 years ago
• yigbt / multiGSEA
  The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.
  ☆18Updated last month
• finkelsteinlab / freebarcodes
  FREE Divergence Error-Correcting DNA Barcodes
  ☆8Updated 6 years ago