Alternatives and similar repositories for lorals_paper_code:

Users that are interested in lorals_paper_code are comparing it to the libraries listed below

• mortazavilab / cerberus
  ☆16Updated 6 months ago
• WGLab / LIQA
  Long-read Isoform Quantification and Analysis
  ☆39Updated last month
• dixonlab / hic_breakfinder
  ☆35Updated 5 years ago
• LappalainenLab / lorals
  ☆33Updated last year
• PulverCyril / craTEs
  Estimate the cis-regulatory activity of transposable element (TEs) subfamilies
  ☆10Updated last year
• SziKayLeung / Whole_Transcriptome_Paper
  ☆17Updated 9 months ago
• shuliliu / cattleGTEx
  The cattle Genotype-Tissue Expression atlas v1
  ☆23Updated last year
• deLaatLab / pipe4C
  4C-seq processing pipeline
  ☆23Updated 9 months ago
• XiDsLab / TAGET
  ☆17Updated 2 years ago
• plantformatics / Socrates
  ☆21Updated 7 months ago
• RitchieLabIGH / IRFinder
  ☆13Updated last year
• guigolab / sQTLseekeR2
  R package to detect splicing QTLs (sQTLs)
  ☆12Updated last year
• cortes-ciriano-lab / ReConPlot
  ☆21Updated last month
• adamewing / tldr
  Identify and annotate TE-mediated insertions in long-read sequence data
  ☆41Updated last year
• shawnzhangyx / cvdc_scripts
  scripts for analyzing the CVDC data.
  ☆17Updated 5 years ago
• khuang28jhu / bs3
  BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.
  ☆27Updated 5 years ago
• ma-compbio / Phylo-HMRF
  ☆16Updated 4 years ago
• AmpliconSuite / CoRAL
  Reconstruction of focal amplifications with long reads
  ☆18Updated last week
• ZhaiLab-SUSTech / snuupy
  single-nucleus nanopore reads processing pipeline
  ☆15Updated last year
• mccoy-lab / MAGE
  Analysis of gene expression and splicing diversity in a subset of samples from the 1000 Genomes Project, including eQTL and sQTL discover…
  ☆36Updated 6 months ago
• josiegleeson / BamSlam
  Summarise and plot data from long-read ONT (direct RNA/cDNA) BAM files
  ☆13Updated 10 months ago
• shizhuoxing / scISA-Tools
  single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…
  ☆23Updated 6 months ago
• twlab / TEProf2Paper
  TEProf2 Pipeline used to find promoters and predict protein sequences from RNA-sequencing data
  ☆20Updated last year
• ENCODE-DCC / long-read-rna-pipeline
  ENCODE long read RNA-seq pipeline
  ☆44Updated 2 years ago
• liucongcas / GLORI-tools
  bioinformatic pipeline for GLORI
  ☆18Updated 8 months ago
• olarerin / metaPlotR
  A Perl/R pipeline for plotting metagenes
  ☆37Updated 3 years ago
• zhongmicai / Hic_tools_collection
  ☆10Updated 5 years ago
• CSOgroup / CALDER
  ☆21Updated last year
• gxiaolab / REDITs
  RNA editing tests
  ☆16Updated 4 years ago
• fansalon / TEspeX
  TEspeX - pipeline for Transposable Elements expression quantification
  ☆20Updated last year