guokai8 / scGSVALinks
scGSVA: Perform GSVA for single cell RNA seq
☆61Updated 7 months ago
Alternatives and similar repositories for scGSVA
Users that are interested in scGSVA are comparing it to the libraries listed below
Sorting:
- ☆22Updated last year
- ☆61Updated 5 years ago
- A R package for advanced single cell data viz☆67Updated last year
- Methods for decontamination of single cell data☆47Updated 4 months ago
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 2 months ago
- An R shiny based tool used for single cell RNA-seq data visualization and analysis.☆33Updated 4 years ago
- Aligning gene expression trajectories of single-cell reference and query systems☆66Updated 8 months ago
- Single cell RNA-seq analysis bundle☆34Updated 5 years ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆105Updated last month
- R Package for Single-Cell Dataset Processing and Visualization☆63Updated 3 years ago
- ☆66Updated 11 months ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆31Updated 11 months ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆38Updated last year
- Code repository for single cell RNA-seq☆35Updated 4 years ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆37Updated 4 years ago
- R package for pathway analysis in scRNA-seq data☆73Updated 10 months ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆81Updated 9 months ago
- Principal analysis code used in for analysis of single cell RNAseq of primary untreated colon cancer. As described in: "Spatially organiz…☆39Updated 3 years ago
- inferring cell-cell communication from scRNA-seq of ligand-receptor☆82Updated last year
- marker-based purification of cell types from single-cell RNA-seq datasets☆112Updated last month
- ☆50Updated last year
- Functions for single cell data analysis☆32Updated 4 years ago
- Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022☆37Updated last year
- ☆63Updated 4 years ago
- A tool for removing doublets from single-cell RNA-seq data☆74Updated 4 years ago
- ☆43Updated 10 months ago
- Codes used in pan-T cell analysis☆59Updated 2 years ago
- ☆49Updated 5 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆28Updated 6 months ago
- A unified interface to spatial transcriptomics deconvolution tools☆41Updated last month