Conditional Reciprocal Best Blast
☆43Mar 22, 2017Updated 9 years ago
Alternatives and similar repositories for crb-blast
Users that are interested in crb-blast are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- blast, shmlast☆21Oct 5, 2020Updated 5 years ago
- Understand your transcriptome assembly☆102Mar 22, 2024Updated 2 years ago
- Merge transcriptome assemblies☆31Oct 6, 2016Updated 9 years ago
- A tool to analyze synteny at the protein level.☆14Mar 28, 2018Updated 7 years ago
- ☆11Sep 16, 2021Updated 4 years ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- OrthoFiller: Identifying missing annotations for evolutionarily conserved genes.☆22Dec 1, 2022Updated 3 years ago
- Parallel implementation of OrthoMCL☆21Aug 26, 2022Updated 3 years ago
- re-assembly and analysis of the Marine Microbial Eukaryotic Transcriptome Sequencing Project☆14Sep 18, 2018Updated 7 years ago
- Haploidy and Size Completeness Estimation☆14Apr 11, 2024Updated last year
- Scaffolding of genomic assemblies with RNA seq data☆15Oct 8, 2015Updated 10 years ago
- Scaffolding with RNA-seq read alignment☆21Jul 10, 2018Updated 7 years ago
- Pipelines and tools for the processing of ancient and modern HTS data.☆48Mar 6, 2026Updated 2 weeks ago
- ☆10Apr 20, 2018Updated 7 years ago
- A Python package for testing evolutionary hypotheses in genome-wide approaches.☆33Mar 5, 2021Updated 5 years ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- Phylogenetic Analysis of Long Terminal Repeat Retrotransposons☆18Oct 4, 2022Updated 3 years ago
- Iterative error correction of long reads☆13Dec 9, 2022Updated 3 years ago
- Tools for improving the sensitivity and specificity of genome alignments☆58Mar 12, 2026Updated last week
- ☆28Dec 1, 2022Updated 3 years ago
- EnTAP is moving to GitLab for future changes https://gitlab.com/PlantGenomicsLab/EnTAP☆41Jan 22, 2025Updated last year
- Program for finding horizontal gene transfer using BLAST result☆11May 26, 2023Updated 2 years ago
- The genome annotation service provides automated gene annotation based on the RAST system. This deploys both client and service component…☆11Sep 22, 2020Updated 5 years ago
- BESST - scaffolder for genomic assemblies☆58Jul 6, 2023Updated 2 years ago
- PASA software☆199Feb 12, 2025Updated last year
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Annotated Genome Optimization Using Transcriptome Information☆20May 31, 2020Updated 5 years ago
- Perl scripts for working with the GFF format☆16Aug 24, 2011Updated 14 years ago
- MP-EST estimates species trees from a set of gene trees by maximizing a pseudo-likelihood function☆12Oct 31, 2025Updated 4 months ago
- Code for TAD_SV project☆11Mar 16, 2022Updated 4 years ago
- ☆20Jun 15, 2024Updated last year
- An Interactive Desktop Platform for Drawing Gene Structure and Protein Architecture☆23Aug 8, 2025Updated 7 months ago
- Extensive de-novo TE Annotator☆435Mar 12, 2026Updated 2 weeks ago
- TreeGrafter is a new software tool for annotating uncharacterized protein sequences, using annotated phylogenetic trees.☆13Mar 18, 2026Updated last week
- ☆15Aug 6, 2018Updated 7 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Taxon-aware analysis of clustered protein sequences☆31Jul 1, 2024Updated last year
- haplotypic duplication identification tool☆277Oct 30, 2025Updated 4 months ago
- DNA assembler developed on FER (Croatia), RBI (Croatia) and GIS (Singapore)☆18Jan 18, 2016Updated 10 years ago
- A EXPERIMENTAL fork of minimap2 optimized for assembly-to-reference alignment☆87Apr 8, 2021Updated 4 years ago
- This repository contains a reciprocal BLAST program for filtering down BLAST results to best bidirectional hits. It also contains a toolk…☆17Jan 16, 2025Updated last year
- multiGenomicContext is a pipeline to see your protein in many genomic context as much as gbk you have.☆11Oct 10, 2022Updated 3 years ago
- Rapid discovery of reciprocal best blast pairs.☆10Nov 9, 2024Updated last year