yiliao1022 / TADEvoDrosophilaLinks
Code for TAD_SV project
☆11Updated 3 years ago
Alternatives and similar repositories for TADEvoDrosophila
Users that are interested in TADEvoDrosophila are comparing it to the libraries listed below
Sorting:
- ☆16Updated 5 years ago
- ☆13Updated 2 years ago
- A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes☆30Updated last year
- The tools are used for displaying hic signal of genome☆24Updated 4 years ago
- Yet another Hi-C scaffolding tool☆22Updated last year
- ☆29Updated 2 years ago
- ☆15Updated 3 years ago
- The GitHub repository for the A. thaliana pan-NLR'ome project.☆18Updated 6 years ago
- Invertory of TE-gene isoforms☆13Updated 2 years ago
- Generate pan-gene sets, given a collection of genome assemblies and corresponding gene models.☆17Updated 3 months ago
- ☆15Updated 3 years ago
- “When everything is connected to everything else, for better or worse, everything matters.” Bruce Mau☆19Updated 5 years ago
- This is used to achieve haplotype-resolved assembly of tetraploid genomes using gamete sequencings☆12Updated 4 years ago
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆28Updated 2 months ago
- Code for Article "A pan-genome of 69 Arabidopsis thaliana accessions reveals a conserved genome structure throughout the global species r…☆23Updated last year
- scripts for sequence and feature conversion, annotation, analysis ...☆28Updated 8 months ago
- Easily construct the ML species tree with single-copy gene shared by different species.☆27Updated 7 years ago
- Snakemake pipeline to analyze transposable element 'omics data.☆28Updated last week
- Guide through code for a Minimmap2 genome alignment and a seq-seq-pan pan-genome alignment with visualizations in R. The tutorial present…☆19Updated 6 months ago
- Convert RepeatMasker ".out" file into a gff3 with colors!!!☆23Updated 5 years ago
- Computational Analysis of Gene Expression Evolution☆43Updated 3 months ago
- Whole Genome Annotation Pipeline☆16Updated 5 months ago
- ☆24Updated 2 years ago
- Identification of conserved non-coding sequences in plants☆30Updated last month
- A tool for performing collinearity-incorporating homology inference☆33Updated 2 years ago
- B73Ab10 genome assembly methods☆17Updated 3 years ago
- Inferring natural selection by comparative population genomic analysis across species☆25Updated 2 years ago
- An R package to infer and analyze synteny networks from protein sequences☆34Updated 3 months ago
- ☆28Updated 3 years ago
- scripts for the project of seven thaliana genomes assembly☆42Updated 4 years ago