harta55 / EnTAPLinks
EnTAP is moving to GitLab for future changes https://gitlab.com/PlantGenomicsLab/EnTAP
☆41Updated 11 months ago
Alternatives and similar repositories for EnTAP
Users that are interested in EnTAP are comparing it to the libraries listed below
Sorting:
- ☆35Updated 5 years ago
- TSEBRA: Transcript Selector for BRAKER☆49Updated last month
- HyPo: Super Fast & Accurate Polisher for Long Read Genome Assemblies☆65Updated 5 years ago
- ☆26Updated 10 months ago
- Compute N50/NG50 and auN/auNG☆33Updated 2 years ago
- FASconCAT-G offers a wide range of possibilities to edit and concatenate multiple nucleotide, amino acid, and structure sequence alignmen…☆35Updated last year
- STAG: Species Tree from All Genes☆34Updated 7 years ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆59Updated 2 years ago
- A tool for evaluate long-read de novo assembly results☆48Updated last year
- Scripts to estimate genome size and coverage from kmer distribution generated by jellyfish☆57Updated 2 years ago
- Genome-Genome circle synteny☆25Updated 2 years ago
- Improve the quality of a denovo assembly by scaffolding and gap filling☆57Updated 4 years ago
- A tool for the recovery of unassembled telomeres from soft-clipped read alignments.☆50Updated last month
- Multi-genome synteny block visualization tool☆52Updated 2 months ago
- Conditional Reciprocal Best Blast☆42Updated 8 years ago
- HyPhy standalone analyses☆51Updated 4 months ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆63Updated 5 years ago
- k-mer learning materials☆81Updated 10 months ago
- Generates an NCBI .tbl file of annotations on a genome.☆68Updated 7 years ago
- A shiny application to visualize MCscan result☆38Updated 3 years ago
- The SYNY pipeline investigates synteny between species by reconstructing protein clusters from gene pairs.☆49Updated last week
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆36Updated 3 years ago
- MCMCtreeR: A package to estimate distribution values for temporal node constraints and prepare input files for MCMCtree☆45Updated 6 years ago
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆37Updated 10 months ago
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆76Updated 4 years ago
- ☆45Updated 9 years ago
- A high performance tool to identify orthologs and paralogs across genomes.☆27Updated 2 years ago
- finshingTool☆54Updated 9 years ago
- Synteny Imager☆65Updated last week
- TELR is a fast non-reference transposable element detector from long read sequencing data.☆35Updated 2 years ago