rhysf / Synima
Synteny Imager
☆60Updated 3 weeks ago
Related projects: ⓘ
- BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins☆45Updated 7 months ago
- Generates an NCBI .tbl file of annotations on a genome.☆64Updated 6 years ago
- TSEBRA: Transcript Selector for BRAKER☆46Updated 3 months ago
- ☆78Updated last year
- Assembly methods for nanopore-based metagenomic sequencing: a comparative study☆18Updated 4 years ago
- Tools for working with second gen assemblies, fasta sequences, etc☆92Updated 8 years ago
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆75Updated 3 years ago
- IS mapping software☆50Updated 2 years ago
- A tool for generating bacterial genomes from metagenomes with nanopore long read sequencing☆69Updated 3 years ago
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆65Updated 3 years ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆47Updated last year
- ☆20Updated 6 months ago
- Automated de novo assembly of whole chloroplast genomes.☆43Updated 8 months ago
- ☆41Updated 7 years ago
- paml documentation and tutorials☆43Updated last year
- NLR-Annotator upload☆56Updated last year
- Analysis of convergence between organismal traits and DNA/protein sequences☆43Updated 2 months ago
- a collection of scripts for organising bacterial genomes by species☆75Updated 2 years ago
- Reference-free profiling of polyploid genomes☆96Updated 2 months ago
- Sorts amplicons from Nanopore sequencing data based on similarity☆31Updated 3 weeks ago
- Genome Annotation Without Nightmares☆41Updated 10 months ago
- PATO is a R package designed to analyze pangenomes (set of genomes) intra or inter species.☆54Updated 11 months ago
- Fast k-mer based tool for multi locus sequence typing (MLST)☆42Updated 4 years ago
- Adapter trimmer for Oxford Nanopore reads using ab initio method☆34Updated 9 months ago
- Tutorial about R package PopGenome☆39Updated 5 years ago
- Splitting of sequence reads by internal adapter sequence search☆48Updated last year
- Neural network classification of TE☆81Updated last year
- A software to assemble chloroplast and mitochodrial genomes using PacBio data☆37Updated 4 years ago
- Automatically exported from code.google.com/p/prottest3☆34Updated 6 years ago