stajichlab / OrthoMCLLinks
☆25Updated 9 years ago
Alternatives and similar repositories for OrthoMCL
Users that are interested in OrthoMCL are comparing it to the libraries listed below
Sorting:
- Generates an NCBI .tbl file of annotations on a genome.☆68Updated 7 years ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆62Updated 5 years ago
- Automatically exported from code.google.com/p/prottest3☆37Updated 7 years ago
- Scripts to estimate genome size and coverage from kmer distribution generated by jellyfish☆57Updated 2 years ago
- ☆32Updated 4 years ago
- Conditional Reciprocal Best Blast☆42Updated 8 years ago
- A high performance tool to identify orthologs and paralogs across genomes.☆27Updated 2 years ago
- Pipeline for scaffolding and breaking a genome assembly using 10x genomics linked-reads☆21Updated 3 years ago
- These are scripts that I use frequently in genome annotation projects. Some of them have evolved awkwardly so the code is difficult to fo…☆16Updated 7 years ago
- STAG: Species Tree from All Genes☆34Updated 6 years ago
- HyPhy standalone analyses☆46Updated last month
- Improve the quality of a denovo assembly by scaffolding and gap filling☆56Updated 4 years ago
- ☆21Updated 6 years ago
- Synteny Imager☆64Updated last month
- EnTAP is moving to GitLab for future changes https://gitlab.com/PlantGenomicsLab/EnTAP☆41Updated 8 months ago
- PlantTribes is a collection of automated gene family analysis pipelines for comparative plant genomics☆35Updated 2 years ago
- scripts to parse and analyse MCScanX collinearity output☆32Updated 5 years ago
- finshingTool☆54Updated 8 years ago
- Genome Annotation Pipeline☆36Updated last year
- use paired-end transcriptome reads to scaffold genomes☆11Updated 6 years ago
- calling SVs from Blasr contig level alignments☆54Updated 7 years ago
- Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files.☆38Updated 2 years ago
- High throughput protein function annotation with Human Readable Description (HRDs) and Gene Ontology (GO) Terms.☆67Updated 2 years ago
- A tool for evaluate long-read de novo assembly results☆48Updated last year
- ☆44Updated 8 years ago
- orthology assignment using phylogenetic and network analyses☆47Updated 6 months ago
- A stand-alone application for constructing websites for visualizing and browsing synteny blocks☆18Updated 4 years ago
- In-silico PCR, primer design and padlock design for in-situ sequencing☆51Updated last month
- ☆36Updated 7 years ago
- Compute N50/NG50 and auN/auNG☆32Updated last year