stajichlab / OrthoMCL
☆25Updated 9 years ago
Alternatives and similar repositories for OrthoMCL
Users that are interested in OrthoMCL are comparing it to the libraries listed below
Sorting:
- A high performance tool to identify orthologs and paralogs across genomes.☆26Updated 2 years ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆60Updated 4 years ago
- ☆32Updated 4 years ago
- STAG: Species Tree from All Genes☆34Updated 6 years ago
- Automatically exported from code.google.com/p/prottest3☆36Updated 7 years ago
- EnTAP is moving to GitLab for future changes https://gitlab.com/PlantGenomicsLab/EnTAP☆40Updated 3 months ago
- Conditional Reciprocal Best Blast☆41Updated 8 years ago
- Genome-Genome circle synteny☆25Updated last year
- Improved Phased Assembler☆28Updated 3 years ago
- Convergent substitution detection tool based on the PCOC model☆30Updated 3 years ago
- Generates an NCBI .tbl file of annotations on a genome.☆66Updated 7 years ago
- Pipeline for scaffolding and breaking a genome assembly using 10x genomics linked-reads☆22Updated 2 years ago
- scripts to parse and analyse MCScanX collinearity output☆31Updated 5 years ago
- Genome Annotation Pipeline☆35Updated 8 months ago
- ☆26Updated 4 years ago
- A repository for the lessons and notebooks used for Binder tutorials☆13Updated 4 years ago
- Genome assembly scaffolding using information from paired-end/mate-pair libraries, long reads, and synteny to closely related species.☆24Updated 6 years ago
- Yet another Hi-C scaffolding tool☆19Updated 6 months ago
- Given a reference, PhaME extracts SNPs from complete genomes, draft genomes and/or reads. Uses SNP multiple sequence alignment to constr…☆33Updated last year
- A Python package for testing evolutionary hypotheses in genome-wide approaches.☆31Updated 4 years ago
- Improve the quality of a denovo assembly by scaffolding and gap filling☆57Updated 4 years ago
- scripts for sequence and feature conversion, annotation, analysis ...☆27Updated 2 months ago
- ☆27Updated last year
- A shiny application to visualize MCscan result☆36Updated 2 years ago
- genomic alignment similarity search tool☆18Updated this week
- use paired-end transcriptome reads to scaffold genomes☆11Updated 5 years ago
- Compute N50/NG50 and auN/auNG☆32Updated last year
- Scripts to estimate genome size and coverage from kmer distribution generated by jellyfish☆56Updated 2 years ago
- Data analysis of Funannotate and Orthofinder outputs to Pangenome results☆19Updated 4 years ago
- ☆43Updated 8 years ago