wurmlab / genevalidatorLinks
GeneValidator: Identify problems with predicted genes
☆49Updated last year
Alternatives and similar repositories for genevalidator
Users that are interested in genevalidator are comparing it to the libraries listed below
Sorting:
- An integrated high performance bioinformatics toolkit☆23Updated 6 years ago
- RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference…☆67Updated 3 years ago
- An approximate sequence pattern matcher for FASTQ/FASTA files.☆32Updated 10 years ago
- Merge transcriptome assemblies☆31Updated 9 years ago
- Find Unique genomic Regions☆32Updated 2 weeks ago
- FAST: Fast Analysis of Sequences Toolbox☆31Updated 6 years ago
- Symmetric DUST for finding low-complexity regions in DNA sequences☆45Updated 6 months ago
- PERF is an Exhaustive Repeat Finder☆33Updated 4 years ago
- RPHAST: Phylogenetic Analysis with Space/Time Models in R☆11Updated last year
- ✏️ Genome assembly polishing & SNV detection☆72Updated 4 months ago
- Fast download BLAST databases from NCBI.☆35Updated 2 years ago
- 🚝RAILS and 👞🔨Cobbler: Assembly Improvement by Long Sequence Scaffolding/Gap-filling☆27Updated 2 years ago
- Error correction for Illumina RNA-seq reads☆67Updated last month
- transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotation☆27Updated last year
- MetaSV: An accurate and integrative structural-variant caller for next generation sequencing☆59Updated 8 years ago
- A tool to extract LOH blocks from VCF, BAM and FASTA data☆25Updated last year
- A web wrapper for GeneValidator☆11Updated 4 years ago
- De novo transcriptome assembler for short reads☆64Updated 7 years ago
- MindTheGap is a SV caller for short read sequencing data dedicated to insertion variants (all sizes and types). It can also be used as a …☆37Updated 3 years ago
- Conditional Reciprocal Best Blast☆43Updated 8 years ago
- PacBio hybrid error correction through iterative short read consensus☆60Updated 6 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆35Updated 6 years ago
- Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly data sets as a …☆47Updated 3 years ago
- ☆36Updated 9 months ago
- Guided synteny alignment between duplicated genomes (within specified quota constraint)☆59Updated 8 years ago
- The final version 2 release of our software to detect core genes in eukaryotic genomes☆29Updated 10 years ago
- A phylogenetic profile analysis tool☆38Updated 2 months ago
- Lightweight single-html-file-based Genome Segments playground for Visualize genome features cluster(gene arrow map or other features), ad…☆33Updated 5 years ago
- ⛓ Long Interval Nucleotide K-mer Scaffolder☆73Updated 10 months ago
- A toolkit for annotation of transposable element families from unassembled sequence reads☆31Updated last month