wurmlab / genevalidatorLinks
GeneValidator: Identify problems with predicted genes
☆49Updated last year
Alternatives and similar repositories for genevalidator
Users that are interested in genevalidator are comparing it to the libraries listed below
Sorting:
- Symmetric DUST for finding low-complexity regions in DNA sequences☆45Updated 6 months ago
- ⛓ Long Interval Nucleotide K-mer Scaffolder☆73Updated 9 months ago
- Lightweight single-html-file-based Genome Segments playground for Visualize genome features cluster(gene arrow map or other features), ad…☆33Updated 5 years ago
- transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotation☆27Updated last year
- PERF is an Exhaustive Repeat Finder☆34Updated 4 years ago
- 🚝RAILS and 👞🔨Cobbler: Assembly Improvement by Long Sequence Scaffolding/Gap-filling☆27Updated 2 years ago
- ✏️ Genome assembly polishing & SNV detection☆71Updated 3 months ago
- RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference…☆67Updated 3 years ago
- MetaSV: An accurate and integrative structural-variant caller for next generation sequencing☆59Updated 8 years ago
- Merge transcriptome assemblies☆31Updated 9 years ago
- 🔗Genome assembly scaffolder using minimizer graphs☆85Updated last year
- PacBio hybrid error correction through iterative short read consensus☆60Updated 6 years ago
- Fast download BLAST databases from NCBI.☆35Updated last year
- De novo transcriptome assembler for short reads☆64Updated 7 years ago
- de novo virus assembler of Illumina paired reads☆58Updated 4 years ago
- Conditional Reciprocal Best Blast☆43Updated 8 years ago
- A high throughput sequence read toolset using a streaming approach facilitated by Linux pipes☆51Updated last year
- Fast & accurate alignment of barcoded short-reads☆32Updated 2 years ago
- An integrated high performance bioinformatics toolkit☆23Updated 6 years ago
- Error correction for Illumina RNA-seq reads☆67Updated 3 weeks ago
- Genome guided re-segmention and visualization for raw nanopore sequencing data.☆47Updated 7 years ago
- A EXPERIMENTAL fork of minimap2 optimized for assembly-to-reference alignment☆87Updated 4 years ago
- Find Unique genomic Regions☆32Updated 2 weeks ago
- RPHAST: Phylogenetic Analysis with Space/Time Models in R☆11Updated last year
- MindTheGap is a SV caller for short read sequencing data dedicated to insertion variants (all sizes and types). It can also be used as a …☆37Updated 3 years ago
- FALCON-Phase integrates PacBio long-read assemblies with Phase Genomics Hi-C data to create phased, diploid, chromosome-scale scaffolds☆73Updated 5 years ago
- A toolkit for annotation of transposable element families from unassembled sequence reads☆31Updated last month
- Genome comparison via de Bruijn graph. To get the latest stable version, please visit our site.☆70Updated 5 years ago
- Guided synteny alignment between duplicated genomes (within specified quota constraint)☆59Updated 8 years ago
- deSALT - De Bruijn graph-based Spliced Aligner for Long Transcriptome reads☆44Updated 3 years ago