sjackman / fastascriptsLinks
Manipulate FASTA files
☆30Updated 11 years ago
Alternatives and similar repositories for fastascripts
Users that are interested in fastascripts are comparing it to the libraries listed below
Sorting:
- Scripts to estimate genome size and coverage from kmer distribution generated by jellyfish☆57Updated 2 years ago
 - finshingTool☆54Updated 8 years ago
 - Utilities for analyzing next generation sequencing data☆17Updated 7 years ago
 - Improve the quality of a denovo assembly by scaffolding and gap filling☆56Updated 4 years ago
 - ☆45Updated 8 years ago
 - Error correction for Oxford Nanopore data☆47Updated 4 years ago
 - GBSX: a toolkit for experimental design and demultiplexing genotyping by sequencing experiments☆18Updated 9 years ago
 - TULIP - The Uncorrected Long read Itegration Pipeline☆27Updated 7 years ago
 - Synteny Imager☆65Updated this week
 - Pipelines and tools for the processing of ancient and modern HTS data.☆47Updated 3 weeks ago
 - Generates an NCBI .tbl file of annotations on a genome.☆68Updated 7 years ago
 - Conditional Reciprocal Best Blast☆42Updated 8 years ago
 - ☆26Updated 6 years ago
 - TGS scaffolding☆47Updated 3 years ago
 - A software to assemble chloroplast and mitochodrial genomes using PacBio data☆40Updated 5 years ago
 - A reference-assisted assembly tool for producing draft chromosome sequences.☆41Updated last year
 - identify potential non-animal transcripts in animal transcriptomes☆11Updated 4 years ago
 - An easy way to run BioNano genomic analysis☆28Updated 4 years ago
 - reference-based long read assemblies of bacterial genomes☆51Updated 4 years ago
 - ☆17Updated 7 years ago
 - Genome Annotation Without Nightmares☆46Updated 9 months ago
 - Experimental pipeline for correcting nanopore reads☆39Updated 8 years ago
 - A program to call variants from genome alignment☆81Updated 6 months ago
 - UCSC Nanopore☆44Updated 6 years ago
 - ☆24Updated 8 years ago
 - A statistical framework for ploidy estimation using NGS short-read data☆62Updated 7 years ago
 - Some simple scripts to ease management and local basecalling of millions of FAST5 files☆25Updated 7 years ago
 - Fast and pretty dotplots for whole genomes assemblies using minimap and R/ggplot2☆76Updated 9 years ago
 - Rank-based Gene Ontology analysis of gene expression data☆42Updated 2 years ago
 - ☆33Updated 4 years ago