carmonalab / TILPREDLinks
Tumor-Infiltrating CD8 Lymphocytes states prediction
☆13Updated last year
Alternatives and similar repositories for TILPRED
Users that are interested in TILPRED are comparing it to the libraries listed below
Sorting:
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆39Updated 4 years ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆31Updated last year
- A unified interface to spatial transcriptomics deconvolution tools☆45Updated last month
- ☆19Updated last year
- ☆62Updated 2 years ago
- ☆41Updated 7 years ago
- Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data☆22Updated 4 years ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆93Updated 7 months ago
- Collection of scripts for analysis of pan fetal immune atlas☆29Updated 3 years ago
- R package for Bioconductor submission☆37Updated 3 years ago
- R package expanding integrative analysis capabilities of Seurat by providing seamless access to popular integration methods and to an int…☆31Updated 3 months ago
- ☆27Updated 3 years ago
- MeDuSA is a fine-resolution cellular deconvolution method that leverages scRNA-seq data as a reference to estimate cell-state abundance i…☆43Updated 10 months ago
- Immune evasion before tumor invasion in early squamous lung cell carcinogenesis☆16Updated 4 years ago
- Gene set enrichment analysis for single-cell RNAseq data☆30Updated 2 years ago
- SCDC☆45Updated 6 months ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 4 years ago
- ☆18Updated 3 years ago
- Niche Interactions and Cellular Heterogeneity in Extracellular Signaling☆57Updated last month
- Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)☆17Updated 2 years ago
- R package for specialised analysis of single cell data☆40Updated 3 years ago
- R package for detection of cell-cell interaction using Non-negative Tensor Decomposition☆34Updated 6 months ago
- Calculating Tumor microenvironment score☆29Updated 2 years ago
- ☆60Updated 4 months ago
- Functions for single cell data analysis☆32Updated 4 years ago
- scMEGA: Single-cell Multiomic Enhancer-based Gene regulAtory network inference☆43Updated last year
- R package for SIGMA, a clusterability measure for scRNA-seq data☆12Updated 4 years ago
- CeLEry: cell location recovery in single-cell RNA sequencing☆35Updated 10 months ago
- Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids☆30Updated 2 years ago
- R package for pathway analysis in scRNA-seq data☆76Updated last year