carmonalab / TILPREDLinks
Tumor-Infiltrating CD8 Lymphocytes states prediction
☆14Updated 2 years ago
Alternatives and similar repositories for TILPRED
Users that are interested in TILPRED are comparing it to the libraries listed below
Sorting:
- ☆28Updated 4 years ago
- Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data☆22Updated 4 years ago
- ☆20Updated last year
- ☆53Updated 2 years ago
- Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids☆30Updated 2 years ago
- a simple R data package for curated cancer pathway-specific gene lists☆13Updated 5 years ago
- R package for Bioconductor submission☆38Updated 3 years ago
- identifying disease critical cell types and programs from single cell RNAseq☆58Updated 3 years ago
- ☆63Updated 2 years ago
- ☆18Updated 3 years ago
- ☆11Updated last year
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆39Updated 5 years ago
- code for data processing and visualisation associated with the stromal subclasses manuscript☆13Updated 5 years ago
- ☆23Updated 6 months ago
- Gene set enrichment analysis for single-cell RNAseq data☆31Updated 2 years ago
- R package expanding integrative analysis capabilities of Seurat by providing seamless access to popular integration methods and to an int…☆31Updated 5 months ago
- Ordering gene-expression and functional events in single-cell experiments☆29Updated last year
- Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)☆18Updated 2 years ago
- scWGCNA☆61Updated 3 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated last year
- A unified interface to spatial transcriptomics deconvolution tools☆45Updated last week
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 4 years ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆31Updated 3 years ago
- ☆17Updated 2 years ago
- R package for SIGMA, a clusterability measure for scRNA-seq data☆12Updated 4 years ago
- ☆37Updated 3 years ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆32Updated 3 years ago
- ☆62Updated 5 months ago
- MeDuSA is a fine-resolution cellular deconvolution method that leverages scRNA-seq data as a reference to estimate cell-state abundance i…☆43Updated 11 months ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆32Updated last year