carmonalab / TILPREDLinks
Tumor-Infiltrating CD8 Lymphocytes states prediction
☆12Updated last year
Alternatives and similar repositories for TILPRED
Users that are interested in TILPRED are comparing it to the libraries listed below
Sorting:
- Immune evasion before tumor invasion in early squamous lung cell carcinogenesis☆16Updated 4 years ago
- ☆19Updated last year
- ☆26Updated 3 years ago
- ☆58Updated last year
- Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data☆22Updated 3 years ago
- Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)☆16Updated 2 years ago
- A unified interface to spatial transcriptomics deconvolution tools☆42Updated this week
- code for data processing and visualisation associated with the stromal subclasses manuscript☆11Updated 4 years ago
- R package for SIGMA, a clusterability measure for scRNA-seq data☆12Updated 3 years ago
- Collection of scripts for analysis of pan fetal immune atlas☆28Updated 3 years ago
- ☆53Updated 2 years ago
- ☆40Updated 6 years ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆38Updated 4 years ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆30Updated last year
- R package expanding integrative analysis capabilities of Seurat by providing seamless access to popular integration methods and to an int…☆31Updated last month
- R package for Bioconductor submission☆37Updated 2 years ago
- identifying disease critical cell types and programs from single cell RNAseq☆57Updated 3 years ago
- SCDC☆45Updated 3 months ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆28Updated 3 years ago
- MeDuSA is a fine-resolution cellular deconvolution method that leverages scRNA-seq data as a reference to estimate cell-state abundance i…☆43Updated 7 months ago
- Mosaic single cell data integration using non-overlapping features☆37Updated 3 years ago
- Single-cell transcriptome profiling of an adult human cell atlas of 15 major organs☆38Updated last year
- Bi-order integration (in silico multi-omics data) of single cell RNA sequencing, single cell ATAC sequencing, spacial transcriptomics and…☆36Updated 2 years ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆87Updated 4 months ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 4 years ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆31Updated 2 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆33Updated 6 months ago
- ☆16Updated last year
- a simple R data package for curated cancer pathway-specific gene lists☆12Updated 5 years ago
- ☆20Updated 2 months ago