Tumor-Infiltrating CD8 Lymphocytes states prediction
☆14Feb 7, 2024Updated 2 years ago
Alternatives and similar repositories for TILPRED
Users that are interested in TILPRED are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A repository of case studies using ProjecTILs☆15Jul 26, 2024Updated last year
- NicheDE is a method that detects context dependent changes in gene expression in spatial transcriptomic data.☆24Jun 10, 2025Updated last year
- R package for semi-supervised single-cell data integration☆98Jan 27, 2026Updated 4 months ago
- ☆13May 27, 2025Updated last year
- R vignettes for processing BUS format single-cell RNA-seq files☆21Feb 8, 2020Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data. This is a novel R package of the RaceID3 and S…☆44Nov 25, 2024Updated last year
- Interpretation of cell states using reference single-cell maps☆321Dec 19, 2025Updated 5 months ago
- Single Cell Epigenome-based Inference of Activity☆19Sep 27, 2023Updated 2 years ago
- POOL (Peptide Optimization with Optimal Learning): code for "Discovering de novo peptide substrates for enzymes using machine learning"☆10Oct 18, 2018Updated 7 years ago
- TCGA Splicing Variation Database Cancer Splicing Variant Database Cancer alternative splicing database☆13Jun 9, 2025Updated last year
- R package for SIGMA, a clusterability measure for scRNA-seq data☆13Dec 15, 2021Updated 4 years ago
- Collection of useful methods for single cell analysis☆15Aug 22, 2024Updated last year
- ☆17Sep 13, 2024Updated last year
- A tool for removing doublets from single-cell RNA-seq data☆75Dec 2, 2020Updated 5 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- A unified downloader+preprocessor for cancer genomics datasets☆16Apr 7, 2024Updated 2 years ago
- ☆27Sep 2, 2021Updated 4 years ago
- FASTAptamer: A Bioinformatic Toolkit for High-Throughput Sequence Analysis of Combinatorial Selections☆10Oct 7, 2024Updated last year
- code for Zagidullin et al 2021 "Comparative analysis of molecular fingerprints in prediction of drug combination effects"☆17Aug 1, 2022Updated 3 years ago
- Somatic point mutation caller☆34Jan 7, 2026Updated 5 months ago
- Inference of cell-cell communication from single-cell RNAseq data☆49Apr 21, 2025Updated last year
- ☆62Jun 21, 2022Updated 3 years ago
- A 3-day R course given in University College Cork that encompasses various elements off reproducible research facilitated through RStudio…☆11Jun 17, 2020Updated 5 years ago
- Code for "Single cell transcriptomes from human kidneys reveal the cellular identity of renal tumours"☆27Jun 5, 2018Updated 8 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆10Nov 5, 2023Updated 2 years ago
- ☆131Mar 27, 2022Updated 4 years ago
- CONICS: COpy-Number analysis In single-Cell RNA-Sequencing☆77Feb 27, 2023Updated 3 years ago
- Using TCR and expression for sequence embedding☆63Jan 6, 2026Updated 5 months ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆122Apr 26, 2025Updated last year
- 命例☆10Sep 27, 2018Updated 7 years ago
- A method for calculating single cell entropy and reconstructing cell differentiation lineage using single-cell RNA-seq data☆10May 26, 2023Updated 3 years ago
- R package for the analysis of single-cell immune repertoires☆45Feb 7, 2025Updated last year
- ☆12Sep 4, 2025Updated 9 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Pooled Sequencing Analysis for Sex Signal☆15Sep 14, 2021Updated 4 years ago
- The following code accompanies a manuscript combining single-cell RNA-sequencing and genotyping to analyze cellular hierarchies in acute …☆47Apr 8, 2020Updated 6 years ago
- Highly informative TCR representation model☆16Nov 26, 2025Updated 6 months ago
- Instructions and helpful R code for Running GEMMA and GAPIT☆13Sep 14, 2017Updated 8 years ago
- Publication Page for ArchR Manuscript 2020☆24Aug 17, 2021Updated 4 years ago
- Code to reproduce analysis of Milo manuscript☆15Aug 3, 2022Updated 3 years ago
- R interface to megadepth: BigWig and BAM related utilities☆14Mar 31, 2026Updated 2 months ago