miccec / yaGSTLinks
☆13Updated 7 years ago
Alternatives and similar repositories for yaGST
Users that are interested in yaGST are comparing it to the libraries listed below
Sorting:
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆12Updated 2 years ago
- ☆22Updated 2 years ago
- ☆17Updated last year
- ☆16Updated 4 years ago
- Calculating Tumor microenvironment score☆29Updated 2 years ago
- ☆13Updated 10 months ago
- Gene set enrichment analysis for single-cell RNAseq data☆28Updated 2 years ago
- R package for SIGMA, a clusterability measure for scRNA-seq data☆12Updated 3 years ago
- The codes and files for the study of subsolid nodules (SSN).☆14Updated 4 years ago
- ☆26Updated 3 years ago
- Repository for scRNAseq study of human kidneys☆15Updated 5 years ago
- ☆18Updated last year
- ☆16Updated last year
- Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…☆22Updated 2 years ago
- ☆16Updated 2 years ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆32Updated 3 years ago
- Human Endometrial Cell Atlas (HECA). An integrated single-cell reference atlas of the human endometrium.☆24Updated 11 months ago
- code for data processing and visualisation associated with the stromal subclasses manuscript☆11Updated 4 years ago
- MultiK is a data-driven tool that objectively assesses the optimal number(s) of clusters based on the concept of consensus clustering via…☆22Updated last year
- A pipeline for scRNA-seq data analysis☆14Updated 2 months ago
- Code for our paper: https://www.biorxiv.org/content/10.1101/528463v1☆18Updated 5 years ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆26Updated 3 years ago
- Lung cancer 10X analysis☆11Updated 4 years ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆31Updated 6 months ago
- scAB detects multiresolution cell states with clinical significance☆17Updated 2 years ago
- The source code of web server TIP, including example data.☆19Updated 6 years ago
- Calculate NEPC risk score from bulk transcriptome data or single-cell RNA-seq for prostate cancer☆14Updated 6 months ago
- Cluster Identity Predictor (R package implementation)☆20Updated 3 years ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆36Updated last year
- ☆34Updated last year