Bishop-Laboratory / correlationAnalyzeRLinks
Generate Novel Insights from Gene Correlation Data
☆12Updated 3 years ago
Alternatives and similar repositories for correlationAnalyzeR
Users that are interested in correlationAnalyzeR are comparing it to the libraries listed below
Sorting:
- The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.☆20Updated last month
- BANDITS: Bayesian ANalysis of DIfferenTial Splicing☆19Updated 2 months ago
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers☆15Updated 7 years ago
- Comprehensive Human Expressed SequenceS☆18Updated 5 months ago
- Smooth-quantile Normalization Adaptation for Inference of co-expression Links☆16Updated 2 years ago
- ORF Quantification pipeline for Alternative Splicing☆16Updated 4 years ago
- ☆17Updated last year
- Build single sample pair-based (rule-based) classifiers using top-score pairs or random forest for multi-class problems.☆13Updated 2 years ago
- NASQAR: A web-based platform for High-throughput sequencing data analysis and visualization☆32Updated 5 years ago
- This repository contains the code to run the ASCETS arm-level copy number events caller for targeted sequencing data. ASCETS produces arm…☆18Updated last year
- Python function for TMB snake plots☆16Updated 5 years ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆18Updated 3 weeks ago
- knowledge-based genotyping of cancer hotspots from the tumor BAM files☆21Updated 4 years ago
- interactive plots for differential expression analysis☆34Updated 6 months ago
- Model-based tumour subclonal deconvolution using population genetics☆33Updated 2 weeks ago
- methylR: a single shiny solution from sequencer data to pathway analysis☆12Updated last year
- Bioinformatics Pipeline☆12Updated 3 years ago
- ☆18Updated 4 years ago
- Clonal and subclonal Copy Number Alteration quality check integrating somatic mutation☆24Updated 2 months ago
- Extracting mutational signatures via LASSO. The manuscript of the method is published on PLOS Computational Biology and available at: htt…☆11Updated 2 months ago
- ☆17Updated last year
- NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.☆19Updated 3 years ago
- GWAS and rare variants tests at high speed using regenie☆16Updated last month
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Updated 2 years ago
- The official repository for the deepSNV bioconductor packages. Branch master tracks the official Bioconductor development branch.☆17Updated 3 years ago
- mitochondrial variant analysis tools☆15Updated 4 years ago
- Code for EpiMap data browser☆14Updated last year
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆28Updated 4 years ago
- ☆22Updated 3 months ago
- Pipeline for Quality Control of Ribo-Seq data, selection of P-site offsets, and codon usage statistics.☆19Updated 2 years ago