TCGA Splicing Variation Database Cancer Splicing Variant Database Cancer alternative splicing database
☆13Jun 9, 2025Updated 9 months ago
Alternatives and similar repositories for TSVdb
Users that are interested in TSVdb are comparing it to the libraries listed below
Sorting:
- Tumor-Infiltrating CD8 Lymphocytes states prediction☆14Feb 7, 2024Updated 2 years ago
- Single-cell Iso Prep☆17Oct 28, 2023Updated 2 years ago
- Example code from metagenomics book (https://www.gitbook.com/book/kyclark/metagenomics/details)☆18Feb 1, 2019Updated 7 years ago
- Tool for the detection and quantification of alternative splicing events from RNA-Seq data.☆111Jul 23, 2025Updated 7 months ago
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆26Jul 20, 2024Updated last year
- Publication Page for ArchR Manuscript 2020☆23Aug 17, 2021Updated 4 years ago
- Analysis Pipeline to analyze Nanopore RNAseq data☆29Mar 1, 2022Updated 4 years ago
- R-Based API for accessing the MSKCC Cancer Genomics Data Server (CGDS)☆25Dec 15, 2020Updated 5 years ago
- Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data☆22Nov 10, 2021Updated 4 years ago
- The Isoforms from Single-Cell; Long-read Expression Suite☆38Jan 14, 2025Updated last year
- gnomAD browser pre-ASHG 2018☆33Nov 2, 2020Updated 5 years ago
- Pipeline for computing OTU tables from 16S or ITS amplicon sequencing data.☆33Jun 18, 2023Updated 2 years ago
- ☆10Dec 28, 2019Updated 6 years ago
- An interactive shiny app for processing DIA-nn output (filtering, MaxLFQ, Top3, iBAQ, etc.)☆14Updated this week
- ☆10May 31, 2022Updated 3 years ago
- Assign genotypes to Salmonella Paratyphi A isolates using their whole-genome data.☆10Mar 6, 2025Updated last year
- Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022☆39Jan 30, 2024Updated 2 years ago
- Multi-agent LLM driven cell type annotation for single-cell RNA-Seq data☆31Updated this week
- A tool for investigating alternative mRNA splicing in next generation mRNA sequence data.☆11Mar 3, 2017Updated 9 years ago
- A web application framework for analysis and visualization of High throughput Sequencing metagenomic data☆10Nov 21, 2016Updated 9 years ago
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11May 25, 2023Updated 2 years ago
- ☆13Feb 12, 2026Updated 3 weeks ago
- ☆39Apr 25, 2023Updated 2 years ago
- ☆10Nov 3, 2023Updated 2 years ago
- ☆10Oct 6, 2017Updated 8 years ago
- INTEND (IntegratioN of Transcriptomic and EpigeNomic Data), a novel algorithm for integrating gene expression and DNA methylation dataset…☆12Dec 12, 2022Updated 3 years ago
- 16S rRNA Sequencing Data from the Human Microbiome Project☆10Oct 30, 2025Updated 4 months ago
- This is a read-only mirror of the CRAN R package repository. arulesSequences — Mining Frequent Sequences☆10Nov 25, 2025Updated 3 months ago
- Draw pan- and core-genome curves from proteinortho output☆10Oct 26, 2023Updated 2 years ago
- 16S rRNA marker gene upstream and dowstream analysis tutorial for the UCT Hex cluster.☆11Jan 15, 2021Updated 5 years ago
- Analysis of Global Burden of Disease data☆12Mar 15, 2021Updated 4 years ago
- Secretory Pathway Reconstruction for Human, CHO, and Mouse☆12Aug 24, 2021Updated 4 years ago
- 灵钠OS轻量版☆10Jun 21, 2021Updated 4 years ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆42Jan 18, 2021Updated 5 years ago
- ☆44Oct 30, 2024Updated last year
- Differential Expression Analysis tool box R lang package for omics data☆47Feb 25, 2026Updated last week
- Small non-coding RNA annotation Pipeline Optimized for rRNA- and tRNA-Derived Small RNAs☆55Jan 9, 2026Updated 2 months ago
- circular RNA analysis toolset☆89Sep 8, 2024Updated last year
- R package that contains plink binaries for windows, mac and linux☆15Oct 14, 2019Updated 6 years ago