Visualization tool for integrating single cell phylogeny with genomic content to clearly display evolutionary progression and tumour heterogeneity.
☆11Sep 12, 2017Updated 9 years ago
Alternatives and similar repositories for cellscape
Users that are interested in cellscape are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R package for single-cell RNA-sequencing analysis☆17Sep 30, 2025Updated last year
- In-silico doublet annotation for single cell RNA sequencing data☆11Jan 7, 2026Updated 9 months ago
- Visualization tool for temporal clonal evolution.☆18Mar 13, 2020Updated 6 years ago
- A robust PCA method of tumor clone and evolution inference from single-cell sequencing data.☆12May 28, 2020Updated 6 years ago
- CALISTA: Clustering And Lineage Inference in Single Cell Transcriptional Analysis☆10May 16, 2019Updated 7 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- R package for robust clustering of single cell RNA sequencing data☆41Jul 10, 2023Updated 3 years ago
- single cell and bulk RNASeq analysis scripts☆13Jan 13, 2022Updated 4 years ago
- rbioapi: User-Friendly R Interface to Biologic Web Services' API☆24Oct 17, 2026Updated 2 weeks ago
- A user-friendly R pipeline for biomarker discovery in single-cell transcriptomics☆14Jan 9, 2026Updated 9 months ago
- R package for the analysis of single cell virology growth curves☆10Jan 31, 2023Updated 3 years ago
- R package for distinguishing cells from background barcodes in droplet-based single-cell RNA-seq data☆11Apr 19, 2023Updated 3 years ago
- R Package for phasing of single cell Strand-seq data☆11Jan 14, 2025Updated last year
- Post hoc cell type classification of single-cell RNA-sequencing data.☆11Oct 5, 2021Updated 5 years ago
- ☆12Jun 10, 2024Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Visualize cancer genomes with FAIR single-cell RNA-seq data☆13Jan 5, 2023Updated 3 years ago
- Estimate microRNA activity in single cells☆13May 4, 2022Updated 4 years ago
- R/Bioconductor package to interactively explore single cell clusters at multiple resolutions☆12Mar 10, 2022Updated 4 years ago
- Normalization for single cell RNA-seq data☆11Aug 25, 2022Updated 4 years ago
- sharing interactive single cell gene expression visualizations from Seurat☆13May 18, 2023Updated 3 years ago
- ☆13Jan 15, 2021Updated 5 years ago
- R package for haplotype phasing using single-cell RNA-seq data☆14Aug 22, 2017Updated 9 years ago
- Cell signatures, with confidence.☆10Jun 1, 2020Updated 6 years ago
- R package for SIGMA, a clusterability measure for scRNA-seq data☆13Dec 15, 2021Updated 4 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Calibrated clustering via knockoffs for single-cell genomics☆11Feb 13, 2025Updated last year
- FastCAR is an R package for Fast Correction of Ambient RNA in droplet based single cell sequencing data☆12Oct 14, 2026Updated 3 weeks ago
- R package for analysis of single-cell data using graphs☆11Jun 8, 2023Updated 3 years ago
- R/Bioconductor package for optimized functional annotation of ChIP-seq data☆10May 15, 2019Updated 7 years ago
- R package for interactive visualization and analysis of single-cell data☆11Feb 21, 2022Updated 4 years ago
- SCREW: A Reproducible Workflow for Single-Cell Epigenomics☆11Oct 22, 2017Updated 9 years ago
- ☆12Apr 26, 2020Updated 6 years ago
- Tumor-Infiltrating CD8 Lymphocytes states prediction☆15Feb 7, 2024Updated 2 years ago
- An R package for the processing of plate reader and flow cytometry data. This includes: normalisation and calibration of plate reader dat…☆11Aug 28, 2026Updated 2 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Label elements within user drawn gates☆26Oct 28, 2026Updated last week
- Identify cell type based on cell markers for single cell squencing☆12Jul 10, 2024Updated 2 years ago
- Molecular Signatures Database (MSigDB) in a data frame☆15Dec 3, 2018Updated 7 years ago
- Analysis of Single Cell Expression, Normalization and Differential expression☆14Feb 29, 2020Updated 6 years ago
- Bi-order integration (in silico multi-omics data) of single cell RNA sequencing, single cell ATAC sequencing, spacial transcriptomics and…☆42Aug 23, 2023Updated 3 years ago
- R implementation of the BAGEL method to call for gene essentiality significance☆11May 1, 2018Updated 8 years ago
- Genetic Heterogeneity Profiling by Single Cell RNA Sequencing☆37May 14, 2020Updated 6 years ago