prabhakarlab / DUBStepRLinks
Correlation-Based Feature Selection for Single-Cell RNA Sequencing Data
☆19Updated 3 years ago
Alternatives and similar repositories for DUBStepR
Users that are interested in DUBStepR are comparing it to the libraries listed below
Sorting:
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆31Updated 2 years ago
- ☆38Updated last month
- ☆32Updated 8 months ago
- ☆51Updated last year
- Single-cell Case Control Analysis☆52Updated this week
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆33Updated 6 months ago
- scWGCNA☆61Updated 2 years ago
- A robust and accurate cell type classifier for single cell RNA-seq data☆17Updated 2 years ago
- R package for robust clustering of single cell RNA sequencing data☆35Updated last year
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆46Updated last year
- mutation(barcode) caller for 10x single cell data☆45Updated 5 years ago
- R package to detect breakpoints and assign somies to scATAC-seq data☆40Updated this week
- ☆18Updated last year
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆45Updated 2 years ago
- Calculate cluster similarity between clusters from different single cell datasets/batches/samples.☆23Updated 5 months ago
- A pipeline for scRNA-seq data analysis☆15Updated 6 months ago
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆41Updated 3 years ago
- R package of CSOmap(developing☆13Updated 3 years ago
- ☆24Updated last year
- InstaPrism is an R package for fast implementation of BayesPrism☆40Updated last year
- ☆18Updated last year
- ☆39Updated 4 years ago
- ☆34Updated 6 years ago
- ☆32Updated 4 years ago
- Aligning gene expression trajectories of single-cell reference and query systems☆76Updated last month
- ☆47Updated 8 months ago
- R package for SIGMA, a clusterability measure for scRNA-seq data☆12Updated 3 years ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆43Updated 3 years ago
- Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…☆38Updated 2 years ago
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆26Updated 11 months ago