prabhakarlab / DUBStepR
Correlation-Based Feature Selection for Single-Cell RNA Sequencing Data
☆19Updated 2 years ago
Alternatives and similar repositories for DUBStepR:
Users that are interested in DUBStepR are comparing it to the libraries listed below
- ☆29Updated 3 weeks ago
- Aligning gene expression trajectories of single-cell reference and query systems☆59Updated 4 months ago
- Network construction Algorithm☆20Updated 5 months ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆28Updated 2 years ago
- mutation(barcode) caller for 10x single cell data☆44Updated 4 years ago
- ☆47Updated last month
- A tool for removing doublets from single-cell RNA-seq data☆71Updated 4 years ago
- R package for robust clustering of single cell RNA sequencing data☆35Updated 10 months ago
- ☆45Updated 6 months ago
- A robust and accurate cell type classifier for single cell RNA-seq data☆16Updated last year
- scGSVA: Perform GSVA for single cell RNA seq☆53Updated 3 months ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆32Updated last year
- Functional Inference of Gene Regulation☆40Updated 7 months ago
- Generate masks for scRNA-seq clusters on t-SNE or UMAP plots☆25Updated last month
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆26Updated 2 months ago
- scWGCNA☆56Updated 2 years ago
- ☆57Updated 7 months ago
- ☆31Updated 5 years ago
- Functions for single cell data analysis☆29Updated 3 years ago
- Inference of cell-cell communication from single-cell RNAseq data☆47Updated last year
- ☆19Updated last year
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆40Updated 3 years ago
- Inferring CNV data from single cell ATAC seq☆23Updated last year
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆32Updated 4 years ago
- ☆37Updated 3 years ago
- R package of CSOmap(developing☆14Updated 2 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆35Updated 3 years ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆31Updated 2 months ago
- Single cell RNA-seq analysis bundle☆34Updated 5 years ago
- ☆31Updated 9 months ago