carmonalab / ProjecTILs_CaseStudiesLinks
A repository of case studies using ProjecTILs
☆15Updated last year
Alternatives and similar repositories for ProjecTILs_CaseStudies
Users that are interested in ProjecTILs_CaseStudies are comparing it to the libraries listed below
Sorting:
- R package for specialised analysis of single cell data☆38Updated 2 years ago
- A database of useful gene signatures for single-cell analysis☆25Updated 2 months ago
- R package for detection of cell-cell interaction using Non-negative Tensor Decomposition☆34Updated last month
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆42Updated last year
- A software package for connecting cell level features in single cell RNA sequencing data with receptor ligand activity. Please be aware t…☆17Updated 8 months ago
- R Package for Single-Cell Dataset Processing and Visualization☆63Updated 4 years ago
- Single-cell analysis with non-negative matrix factorization☆45Updated 2 weeks ago
- popsicleR, a flexible R package aimed at providing most of the necessary quality controls and preliminary information for complete and de…☆24Updated last year
- ☆41Updated 4 years ago
- R package developed for single-cell RNA-seq analysis. It was designed using the Seurat framework, and offers existing and novel single-ce…☆29Updated 2 years ago
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆37Updated 2 years ago
- Cluster Identity Predictor (R package implementation)☆20Updated 3 years ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆87Updated last month
- ☆88Updated last month
- Visualize clonal expansion via circle-packing. 'APackOfTheClones' extends 'scRepertoire' to produce a publication-ready visualization of …☆17Updated last week
- A unified interface to spatial transcriptomics deconvolution tools☆43Updated this week
- An R shiny based tool used for single cell RNA-seq data visualization and analysis.☆33Updated 4 years ago
- Cell type pipes for R☆51Updated last year
- Single-cell RNA-seq analysis from "Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developing…☆23Updated 5 years ago
- Explore and share your scRNAseq clustering results☆50Updated last year
- R package gathering a set of wrappers to apply various integration methods to Seurat objects (and rate such methods)☆31Updated 2 months ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆31Updated last year
- Enrichment Networks for Pathway Enrichment Analysis☆56Updated 2 years ago
- an integrative analysis tool for analysing large-scale single cell RNA-sequencing data☆33Updated 2 years ago
- The source code of web server TIP, including example data.☆19Updated 6 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆39Updated 3 years ago
- Toolkit for Single-Cell Velocity☆58Updated last month
- This repository consists of scripts and workflows used for generating results, figures, and tables published in the article: Can Liu, And…☆15Updated 4 years ago
- scDataviz: single cell dataviz and downstream analyses☆63Updated 3 years ago
- R package containing the Cerebro application.☆40Updated 3 years ago