carmonalab / ProjecTILs_CaseStudiesLinks
A repository of case studies using ProjecTILs
☆15Updated last year
Alternatives and similar repositories for ProjecTILs_CaseStudies
Users that are interested in ProjecTILs_CaseStudies are comparing it to the libraries listed below
Sorting:
- popsicleR, a flexible R package aimed at providing most of the necessary quality controls and preliminary information for complete and de…☆23Updated last month
- A database of useful gene signatures for single-cell analysis☆28Updated 8 months ago
- R Package for Single-Cell Dataset Processing and Visualization☆65Updated 4 years ago
- R package for detection of cell-cell interaction using Non-negative Tensor Decomposition☆34Updated 7 months ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆46Updated 2 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆40Updated 4 years ago
- Single-cell analysis with non-negative matrix factorization☆45Updated 5 months ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆32Updated last year
- A software package for connecting cell level features in single cell RNA sequencing data with receptor ligand activity. Please be aware t…☆18Updated last year
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆39Updated 3 years ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆36Updated 2 months ago
- An R shiny based tool used for single cell RNA-seq data visualization and analysis.☆34Updated 5 years ago
- R package developed for single-cell RNA-seq analysis. It was designed using the Seurat framework, and offers existing and novel single-ce…☆32Updated last month
- R package for specialised analysis of single cell data☆40Updated 3 years ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆92Updated last month
- A unified interface to spatial transcriptomics deconvolution tools☆45Updated 2 weeks ago
- ☆50Updated 6 years ago
- R package containing the Cerebro application.☆40Updated 4 years ago
- R package expanding integrative analysis capabilities of Seurat by providing seamless access to popular integration methods and to an int…☆31Updated 4 months ago
- Cluster Identity Predictor (R package implementation)☆21Updated 3 years ago
- An r package that works as a wrapper to homologene☆48Updated 2 years ago
- Cell type pipes for R☆52Updated last year
- ☆43Updated 5 years ago
- The source code of web server TIP, including example data.☆20Updated 6 years ago
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆38Updated 7 months ago
- An R wrapper for too-many-cells, for clustering single cells and analyzing cell clade relationships with colorful visualizations.☆26Updated 5 years ago
- scDataviz: single cell dataviz and downstream analyses☆66Updated 4 years ago
- A tool for removing doublets from single-cell RNA-seq data☆76Updated 5 years ago
- Visualize clonal expansion via circle-packing. 'APackOfTheClones' extends 'scRepertoire' to produce a publication-ready visualization of …☆21Updated 4 months ago
- Single-cell RNA-seq analysis from "Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developing…☆25Updated 5 years ago